Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00524 ATGAGCCACCATCATATGAATGATGATATGGTACTCATCTCTCAACTATATCCTGCTTCATACACACAAATGACCTCACAACAAGGGGAGACGAAGTCGAAACGGCGTCGTAATAAGAAGAAAGGTGTGACAAATGGATCAGTGGGAGCCAGGAAGAGGAAGCTGAGTGCAGAGCAAGTTAAACTTCTTGAACTACACTTTGGGAATGAGCATAAACTGGAGTCTGAGAGAAAGGACCGGCTGGCCTCTGAACTGGGCTTGGATCCTCGGCAAGTGGCCGTTTGGTTCCAGAACCGAAGGGCCCGGTGGAAAAGCAAGAATTTGGAGGAAGAGTACTCCAACCTTAAAAAACTCCACGAAACCGCCATCGTCGAGAACTGCCACCTTCAAAACGAGGTGTTGAAGCTAAAGGAGAAGCTTTCAGAGGTTGAGAAAGAGAATCAACGGCTACGAGAGAGTGGGAGCAACAGCCCAACGTCTTCACAAACACAGTCAATTGGAGCTATGGACCCCCCATTTTTGGGAGAGTTTGGAGAAGTATATGACTATGATATGTTTTCCGTGCCAGAGACCCATTACATCAACGGTATGGAATGGGTAAATCTCTACGTGTGA 615 0.4699 MSHHHMNDDMVLISQLYPASYTQMTSQQGETKSKRRRNKKKGVTNGSVGARKRKLSAEQVKLLELHFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKSKNLEEEYSNLKKLHETAIVENCHLQNEVLKLKEKLSEVEKENQRLRESGSNSPTSSQTQSIGAMDPPFLGEFGEVYDYDMFSVPETHYINGMEWVNLYV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00524 204 ProSitePatterns 'Homeobox' domain signature. 81 104 IPR017970 GO:0000981|GO:0006355
Bach10g00524 204 Gene3D - 42 114 - -
Bach10g00524 204 CDD homeodomain 51 107 IPR001356 GO:0003677
Bach10g00524 204 FunFam homeobox-leucine zipper protein ATHB-40 45 114 - -
Bach10g00524 204 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 27 162 IPR045224 GO:0003700
Bach10g00524 204 Pfam Homeodomain 52 104 IPR001356 GO:0003677
Bach10g00524 204 SUPERFAMILY Homeodomain-like 52 114 IPR009057 -
Bach10g00524 204 PRINTS Lambda-repressor HTH signature 86 102 IPR000047 GO:0003677
Bach10g00524 204 PRINTS Lambda-repressor HTH signature 77 86 IPR000047 GO:0003677
Bach10g00524 204 Coils Coil 98 125 - -
Bach10g00524 204 SMART HOX_1 49 110 IPR001356 GO:0003677
Bach10g00524 204 Coils Coil 129 153 - -
Bach10g00524 204 MobiDBLite consensus disorder prediction 152 168 - -
Bach10g00524 204 ProSiteProfiles 'Homeobox' domain profile. 46 106 IPR001356 GO:0003677
Bach10g00524 204 MobiDBLite consensus disorder prediction 144 168 - -
Bach10g00524 204 MobiDBLite consensus disorder prediction 23 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00524 Bach-Chr10 3748222 3749911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00524 1 204 Homeobox Transcription Factor Family AT4G36740 51.613 1.70e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bach10g00524 Homeodomain 1.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00524 K09338 - qsa:O6P43_024730 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00610 4 4085137 4086902 Bach10g00524 10 3748222 3749911 BWGD
Bach10g00524 10 3748222 3749911 Bach10g00524 10 3748222 3749911 ECH