Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00515 ATGCGTCTCTTTCTTGTCATCCATGTCTTGGCTTTTGCCATATTCTGTTGCTTCTCTCTGATTCCGGGGCAGCAGCCTTATATTGGATTGGCCACAAACGCATGTCCCAGAAGGGGTAACTCAAAGTCTATTCGTGGTTACACTTGCAACGGCGTAAATCGTAGTTGCCAAGCTTACCTTACCTTCAGATCTCAACCCATTTACGACTCTGTTTCCACAATCTCTGCTTTGTTGAGTTCTGACCCAACTCAGCTTTCTAAGATAAACAATGTTTCTCGTAATGCAACCTTTGCAACAAATAAGTTGGTGATTGTCCCAGTGAACTGCTCCTGTGCTGGTGAGTATTATCAATCAAACACATCCTATGTGATGGAGAACGCAGACACTTTGTTTTTGATTGCTAACAACACTTTCGAAGGCCTCTCAACCTGTCAAGCTCTGGAGAATCAAAACGAACTGCCTAGTGGAGATTCGTTCACTGGTACAAGACTTGCTGTTCCTCTTAGATGTGCTTGTCCCACAATCAATCAAACTGAGAAAGGTGTCAGGTACCTTTTGAGTTATTTAGTAACCTGGGGTGATTCTGTTTCCTTCATTAGTGAAATATTTGGCGTGGATACTAATACCACCCTTGAAGCTAATACCCTTTCTTATACAAGCACCATTTATCCCTTTACCACAATTTTAGTCCCCCTTCAAGGTCCCCCTTCCCTTTCTCAAATACCTGAGCCACCCCCATCACCTTCGCTCCCATCACCTCCCACTTCATCCTCAGATGGAAACTCGAACAAAACGTGGGTCTATGCTGTTGTTGGAGTAGTTGGAGGTAGTGCTTTAATATTATCACTTGCTGCCATCATTTTCTACAGAGTCTACCGCAAAGGTAAAAAGAAAGATGATCCTGTTATTGTCTGTCAGAGCCAAAGTTTTGAGGCAATTGAGAAACCAGTGGGGAAGATCCGGTTGGAGGGAGAATCTAAAGAATTGTCAGAGATAATGTCCAATATAGGTAAATCGCTTAAAGTGTATAGTTTTAAGGAACTACAGCGAGCAACAGAAGATTTTAGTCCGAGTTTCTGGATCAAAGGATCTGTTTATCGTGGTGTTATTAATGGCGATTTGGCTGCAATTAAGAAGATGGAAGGTGACGTGTCAAAGGAGATAGAACTGCTGAACAAAGTCAACCATTCTAATGTTATACGTCTCTCTGGGGTTAGTTTTAACGAAGGTCATTGGTATCTTGTTTATGAATATGCAGCTAATGGATCCTTGAGTGATTGGATATACTCGAGCAACATTCATGACAAGTTTCTGAATTGGACGCAGAGAATGCAGATTGCGTTGGATGTAGCAACTGGGCTTGACTATCTCCATAGTTTCACTTCTCCACCCCATATCCACAAGGATTTAAAGGGCAGTAACATTCTTCTGGACAGTTATCTCAGAGCAAAGATTGCAAATTTTGGCCTTGCGAGATGTGTTGAAGGCGAGGATGATCAATTTCCCATGACAAGGCATATTGTTGGGACAAAAGGTTACATGGCTCCTGAGTATTTGGAACATGGTGTTGTATCTACAAAGCTAGATGTCTACGCATTTGGGGTTCTGATGATGGAAATGCTCACTGGAAGAGAAGTTGCTGCCTTTTATACAGAAGATAAGGTGAATTTGTCAGATGTTTTAAGTGCCATTCTTGGCGAGGAAAGTGATCAGGAGAGGTTGAGGGACTTTATGGATCCATCTCTGCATGGAAACTGTCCACTGGAACTTGCTAAGTTTGTGATCAAACAGATCCTGAATTGCATAAACAAAGATCCAGCAAATCGCCCTGCCATGCATGAAATTGTGACATTCCTGTCGAGAGCCTTGGACTGA 1875 0.4245 MRLFLVIHVLAFAIFCCFSLIPGQQPYIGLATNACPRRGNSKSIRGYTCNGVNRSCQAYLTFRSQPIYDSVSTISALLSSDPTQLSKINNVSRNATFATNKLVIVPVNCSCAGEYYQSNTSYVMENADTLFLIANNTFEGLSTCQALENQNELPSGDSFTGTRLAVPLRCACPTINQTEKGVRYLLSYLVTWGDSVSFISEIFGVDTNTTLEANTLSYTSTIYPFTTILVPLQGPPSLSQIPEPPPSPSLPSPPTSSSDGNSNKTWVYAVVGVVGGSALILSLAAIIFYRVYRKGKKKDDPVIVCQSQSFEAIEKPVGKIRLEGESKELSEIMSNIGKSLKVYSFKELQRATEDFSPSFWIKGSVYRGVINGDLAAIKKMEGDVSKEIELLNKVNHSNVIRLSGVSFNEGHWYLVYEYAANGSLSDWIYSSNIHDKFLNWTQRMQIALDVATGLDYLHSFTSPPHIHKDLKGSNILLDSYLRAKIANFGLARCVEGEDDQFPMTRHIVGTKGYMAPEYLEHGVVSTKLDVYAFGVLMMEMLTGREVAAFYTEDKVNLSDVLSAILGEESDQERLRDFMDPSLHGNCPLELAKFVIKQILNCINKDPANRPAMHEIVTFLSRALD 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00515 624 SMART serkin_6 334 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00515 624 Pfam Protein kinase domain 376 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00515 624 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 7 623 - -
Bach10g00515 624 Pfam LysM domain 188 231 IPR018392 -
Bach10g00515 624 FunFam PTI1-like tyrosine-protein kinase 3 419 624 - -
Bach10g00515 624 MobiDBLite consensus disorder prediction 236 260 - -
Bach10g00515 624 Gene3D LysM domain 186 238 IPR036779 -
Bach10g00515 624 SMART LysM_2 187 231 IPR018392 -
Bach10g00515 624 MobiDBLite consensus disorder prediction 237 253 - -
Bach10g00515 624 ProSiteProfiles LysM domain profile. 186 230 IPR018392 -
Bach10g00515 624 ProSiteProfiles Protein kinase domain profile. 288 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00515 624 SUPERFAMILY Protein kinase-like (PK-like) 338 619 IPR011009 -
Bach10g00515 624 Gene3D Transferase(Phosphotransferase) domain 1 419 623 - -
Bach10g00515 624 Gene3D Phosphorylase Kinase; domain 1 326 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00515 Bach-Chr10 3696598 3698472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00515 8 623 Receptor kinase-like Gene Family AT2G23770 45.513 7.16e-176 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bach10g00515 Pkinase 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00515 - - gmx:100815842 842.802