Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00511 ATGGATTGGTTTACCAAGTTGCTTAAGGGCTCCAACCATAAAATTTATGGAGGACAATATCATGGGAAATATGGCGATGACCGAATTTGGGATAATCATCATATTTCTACGGATGAATTAACGGATAATGAAAGAGAAGAGATTGATCGTGCAATTGCACTTTCTCTATCAGAGGAGGACCAGAAAGGGAAAAAAGTTATTGAGGACGAATCTGAGTCAGAAGATGAAGAACTTTGCAAGATTGAAGAGGAGGAAGATGAACATCTTGCTAATGTTCGAGATGAGGAAGATGAACATCCTGTTAAGGTTCAACAGGAGGAAGATGACCATCTTGCTAATGTTCAACTTGAAGAAGATGAACAGCTTGCTAGGGCACTTCAAGAAAGTTTAAACATGGACTCTCCTCCTCGATATGACTCTGGCTCTATATTTCAACCTTATCCACTGCACTATCCGCCAGGATACAGGATCTGTGCTGGATGCAACACTGAGATTGGCCGCGGAAGATTTTTAAGTTGCATGGGAGGAGTCTGGCATCCAGAATGTTTCCGCTGCCATGCTTGTAATCTGCCAATCACTGATCATGAGTTTTCCATGTCAGGAAATCGCCCTTACCATAAATCCTGCTACAAGGAGCAGCATCACCCAAGATGTGATGTTTGCAAGAGCTTTATCCCTACAAATTCAGCGGGCCTCATTGAGTATAGGGCACATCCTTTCTGGCAACAGAAGTACTGTCCATCGCATGAGAGTGATGGCACTCCTCGATGTTGTAGCTGTGAACGAATGCAGCCAATGGACACGACATATCTTTTGCTTGATGATGGTCGAAAGCTATGTCTAGAGTGTCTAGACTCTTCAATTATGGATACTCATGAATGCCAGCCTCTTTACCTTGAAATACAAGAATTTTATGAAGGTCTAAATATGAAAGTGCAGCAGCAGATTCCCATGCTTTTGGTTGAGAGACAAGCACTAAACGAGGCCATGGAAGGAGAAAAGAATGGTCATCACCACCAACCAGAAACTAGAGGACTCTGCTTGTCAGAAGAGCAAACGATCACCACTATTTTAAAGAGGCCGAAGATAGGAGGTTACCGGGTCATAGACATGGTAACTGAGCCTTATAGGCTGATCCGTCGGTGTGAAGTGACTGCCATTCTTGTTTTGTATGGCCTTCCTAGGTTATTAACAGGATCAATCCTGGCTCACGAGATGATGCATGCATGGCTCAGGCTAAAAGGTTATCCCAATCTGAAGCCAGAAGTTGAAGAAGGAATTTGCCAAGTCTTGGCTCACATGTGGTTGGATTCAGAGATGTATTCTGGATCTGGCAATGATGTTGCATCATCTTCATCTTCCTTGCCTTCCTCCTCTTCCACGTCATCAAAGAAGGGTAAACGGTCTGACTTTGAGAAGACACTTGGTGAGTTTTTTAAACACCAGATAGAGTCAGATACCTCATCAGCCTATGGAGATGGATTCAGATTGGGTAACCAGGCCGTGCTCAAGTATGGGCTCCGGAGTACCCTTGACCATATAAGCATGACAGGAAATTTTCCATATTGAAACTATCCTATAATTTTCTTACTATTTATATCAACAATACCTCAGATGAGCTTTGTCATATATAATACATAGGATTCACAAATTCCAAAATCATATAATTCAACACCTTTAGATAAAATAAAGCAGTGGAAATGTTCTTCTTAGAGTGCACTACTTG 1726 0.4218 MDWFTKLLKGSNHKIYGGQYHGKYGDDRIWDNHHISTDELTDNEREEIDRAIALSLSEEDQKGKKVIEDESESEDEELCKIEEEEDEHLANVRDEEDEHPVKVQQEEDDHLANVQLEEDEQLARALQESLNMDSPPRYDSGSIFQPYPLHYPPGYRICAGCNTEIGRGRFLSCMGGVWHPECFRCHACNLPITDHEFSMSGNRPYHKSCYKEQHHPRCDVCKSFIPTNSAGLIEYRAHPFWQQKYCPSHESDGTPRCCSCERMQPMDTTYLLLDDGRKLCLECLDSSIMDTHECQPLYLEIQEFYEGLNMKVQQQIPMLLVERQALNEAMEGEKNGHHHQPETRGLCLSEEQTITTILKRPKIGGYRVIDMVTEPYRLIRRCEVTAILVLYGLPRLLTGSILAHEMMHAWLRLKGYPNLKPEVEEGICQVLAHMWLDSEMYSGSGNDVASSSSSLPSSSSTSSKKGKRSDFEKTLGEFFKHQIESDTSSAYGDGFRLGNQAVLKYGLRSTLDHISMTGNFPY 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00511 522 SMART lim_4 157 209 IPR001781 -
Bach10g00511 522 MobiDBLite consensus disorder prediction 447 468 - -
Bach10g00511 522 SMART uim 117 136 IPR003903 -
Bach10g00511 522 SMART uim 43 62 IPR003903 -
Bach10g00511 522 CDD LIM_DA1 158 210 - -
Bach10g00511 522 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 117 136 IPR003903 -
Bach10g00511 522 Pfam Protein DA1 307 517 IPR022087 -
Bach10g00511 522 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 151 183 - -
Bach10g00511 522 FunFam Protein DA1-related 1 152 211 - -
Bach10g00511 522 Coils Coil 67 87 - -
Bach10g00511 522 Gene3D Cysteine Rich Protein 152 216 - -
Bach10g00511 522 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 184 239 - -
Bach10g00511 522 ProSitePatterns LIM zinc-binding domain signature. 158 192 IPR001781 -
Bach10g00511 522 PANTHER PROTEIN DA1-RELATED 2 3 522 IPR045218 -
Bach10g00511 522 Pfam LIM domain 158 213 IPR001781 -
Bach10g00511 522 MobiDBLite consensus disorder prediction 447 464 - -
Bach10g00511 522 ProSiteProfiles LIM domain profile. 156 216 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00511 Bach-Chr10 3679799 3683554 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bach10g00511 DA1-like 7.2e-103 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00511 - - gmx:100817969 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00587 4 3966733 3972703 Bach10g00511 10 3679799 3683554 BWGD
Bach10g00511 10 3679799 3683554 Bach10g00511 10 3679799 3683554 ECH
Bach10g00511 10 3679799 3683554 Bach4g00587 4 3966733 3972703 ECH