Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00483 ATGGAGTTGAGCTTGGATTTGAGTTTGGCCTTTGTCCCCAAAACTGTTTCTGAGTTTCTTGGTGAAGCTTCAAGGAGCAGGGACAGGTCTCAGAAATTATCGATGCTTGATGATTTTGTGAAAAGATTGGAAGATGAAATGAGGAAGATTGATGCCTTCAAACGTGAGCTTCCTCTTTGCATGCTTCTCGTAAACGATGAATTCATACCATTATCATCAAAAGCAAGTTCTGGAGAAAATGGGCAGCTGACGATGGGAATGGATAGCTGTGAGAAGAAGAATTGGATGAGCTCTGTTCAGCTATGGAGCACTGAAACCAAAGCGAGAAATGGACAAGACGACCGATCAGTGCCAGAGAACCCAATTCAAGCACATAATCAGAAAAGCGGGGGAGGGGCATTTATACCCTTTAATGGAAATTCTTCTATGAAGGAAGACAAGGAGGTTTTACAAGTTCCCGGCCTTTGTTTAATGACTCCAGTGCCTGAACTGAATCATAGCAATTCAAAAACCGGCAGCAGAGGAAGTTGTGCTTCGTCTTTGCTTACACAACCGCAGCATCTGCAACAGGCTGCAAGAAAGCAACGGCGATGCTGGTCTCCTGATCTTCATCGGCGTTTCGTTGATGCGCTTCAACAGCTAGGAGGAGCACAAGTGGCCACTCCTAAGCAGATTAGAGAACTAATACAGGTGGAAGGCTTGACAAACGATGAAGTGAAAAGCCATTTGCAAAAATACAGACTTCATGTTAGAAGAGTTGCCCCAACAAATGGCTTGTGGATTTCCCAAGATCATTGTGAAGAGAAATCAAAGGGAAAGTTATCAGAGTCTGGTTCCCCAGATAGTCCTCTTCTTCTAGGAGGATCTGCTAAAGGTTTCTCCTGTTCTGGACGCAGCAGCATGGATGCAGAAGATGACGAGAAATCAGATTGCCACAGTTGGAAAGGTGGGCCTCACCACAAACTAGATGCTGATGTCCTGTCATAA 987 0.4478 MELSLDLSLAFVPKTVSEFLGEASRSRDRSQKLSMLDDFVKRLEDEMRKIDAFKRELPLCMLLVNDEFIPLSSKASSGENGQLTMGMDSCEKKNWMSSVQLWSTETKARNGQDDRSVPENPIQAHNQKSGGGAFIPFNGNSSMKEDKEVLQVPGLCLMTPVPELNHSNSKTGSRGSCASSLLTQPQHLQQAARKQRRCWSPDLHRRFVDALQQLGGAQVATPKQIRELIQVEGLTNDEVKSHLQKYRLHVRRVAPTNGLWISQDHCEEKSKGKLSESGSPDSPLLLGGSAKGFSCSGRSSMDAEDDEKSDCHSWKGGPHHKLDADVLS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00483 328 MobiDBLite consensus disorder prediction 108 132 - -
Bach10g00483 328 MobiDBLite consensus disorder prediction 270 328 - -
Bach10g00483 328 MobiDBLite consensus disorder prediction 300 328 - -
Bach10g00483 328 SUPERFAMILY Homeodomain-like 192 252 IPR009057 -
Bach10g00483 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 191 251 IPR017930 -
Bach10g00483 328 Coils Coil 36 56 - -
Bach10g00483 328 FunFam Myb family transcription factor 193 251 - -
Bach10g00483 328 Pfam Myb-like DNA-binding domain 196 247 IPR001005 -
Bach10g00483 328 Gene3D - 193 250 - -
Bach10g00483 328 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 315 IPR044787 GO:0003700|GO:0006355
Bach10g00483 328 NCBIfam myb-like DNA-binding domain, SHAQKYF class 194 249 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00483 Bach-Chr10 3487187 3488660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00483 1 244 G2-like Transcription Factor Family AT4G37180 44.015 2.89e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bach10g00483 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00483 - - qsa:O6P43_024686 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00483 10 3487187 3488660 Bach4g00548 4 3716718 3724093 BWGD
Bach10g00483 10 3487187 3488660 Bach10g00483 10 3487187 3488660 ECH