Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00482 ATGTCATCATCGAATTCTCCGTGTGCTGCGTGTAAGTTTCTGAGGAGAAAATGCACGCAAGAATGCGTGTTCGCACCGTACTTTCCACCGGACAATCCTCAGCGGTTTGCTTACGTCCACAAGGTTTTCGGCGCAAGCAATGTTGCTAAACTTCTCAACGAGCTCAACGCTTCGCAACGTGACGATGCTGTTAAGTCTTTGGCTTATGAAGCAGAGGCCCGCCTCCGGGACCCAGTTTATGGTTGTGTGGGTCTCATCTCTATTCTTCAGCACAGGCTCAGGCAGATCCAAGGTGAGCTCACCAATGCAAAGAAAGAACTGGCAACTTATATTGGACCCCAGGCCTATCAGAACGTCACTCCCATTTTACCACCTGCCGGAGTCATGCAACAACAGCATCCCGCTAACCCATATTCTTCCGCCGTCTATCCTTACAACAGCATGCCACCACCGCCGCCCATATCCGGTATACCGACGAATAGTGGCCAATTGGTTATTCGTGACCCCCAGCAACAGCAAGGACAGCAGCAACAGCATCAGATCTTGGAAGCTCAGCAACTAGCTGCGGCTGTGGCGGCGAGAGAGCAGCAAGAGATGTTCCGGACTTACGAACAACAGCAGCAGCAAGACTTTCTGAGGTTTAATAGTGGATTCGTTGTGGGTGGTAGTGGGTTTAACCAGATATCTTCTGCTGGCGCTCCCTCTGATATGTCGCCATCATTAGCTCTGGGCACCTTTGATAGCCCCTACCACATTCAATCGCAGGAGGCAGAACAACATCATCCTCACCCCCATCAACTTCAGGCACAGCTAATGCTAACAACGCAGCAACCTCAAGATCAGCAACAAACGCAGCAGTCACAGCAACCACACCAGCAACAGTCCGAAAGCGAGGAGGGCCGGGGTGTGCGTCCTTCTTGTTGA 924 0.5173 MSSSNSPCAACKFLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNASQRDDAVKSLAYEAEARLRDPVYGCVGLISILQHRLRQIQGELTNAKKELATYIGPQAYQNVTPILPPAGVMQQQHPANPYSSAVYPYNSMPPPPPISGIPTNSGQLVIRDPQQQQGQQQQHQILEAQQLAAAVAAREQQEMFRTYEQQQQQDFLRFNSGFVVGGSGFNQISSAGAPSDMSPSLALGTFDSPYHIQSQEAEQHHPHPHQLQAQLMLTTQQPQDQQQTQQSQQPHQQQSESEEGRGVRPSC 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00482 307 Coils Coil 86 106 - -
Bach10g00482 307 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Bach10g00482 307 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 283 - -
Bach10g00482 307 MobiDBLite consensus disorder prediction 268 301 - -
Bach10g00482 307 MobiDBLite consensus disorder prediction 255 307 - -
Bach10g00482 307 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00482 Bach-Chr10 3478074 3478997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00482 1 249 AS2 family AT5G66870 55.882 1.91e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bach10g00482 LOB 2.6e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00547 4 3712741 3713655 Bach10g00482 10 3478074 3478997 BWGD
Bach10g00482 10 3478074 3478997 Bach10g00482 10 3478074 3478997 ECH