Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00479 TTCAATTCAGTATGAGTATATAATGCTTTGAGCTGGAATTAGAATCTATACGCTCTTGTGTTTGGGGGAGAACCCAATCCCAATGGGTCTCTGTACTTCAAAACGTTCTTCAAACCTCACACTTTCATCCCCCAATTCCGATACTCACTCCCCCAGGAACAACACTGTACCTGCTCAAGTCAACTCTCTTCCAGTTAATGACACTTCAAGCTCTGCTAATGGACAAAACCCTAGCAATGAGCGAGGCAAGGAGAAGAATGACACCGAAAATGTTAAAAAATCGCCCTTATTTCCATTTTACAGTCCAAGCCCCTCGCACTATTTGTTCTCGAAGAAGTCTCCGGCAAATGTTAGCTCGAACTCCACGCCAAAGCGTTTTTTCAAGCGGCCGTTCCCGCCACCATCGCCAGCGAAGCACATTAGAGCTGTGCTGGCCAGGCGGCATGGTTCAGTGAAGCCTAATGAGGCGACTATACCAGAAGGGAGTGAAGTAGAGGTGGTTTCTGGGTTGGATAAGAGTTTTGGTTTCTCCAAGCATTTTGGCAATAAATATGAGCTTGGAGATGAGGTTGGGAGAGGACACTTCGGATACACTTGCGCTGCCAAGTTTAAGAAGGGTGAACTCAAGGGGCAACAAGTGGCTGTTAAAGTCATCCACAAAGCTAAGATGACCACTGCCATCGCTATTGAGGATGTGAGAAGGGAAGTTAAAATATTGAGAGCTTTGACTGGACATAAGAATCTAGTACAATTCTACGATGCATATGAAGACCATGATAATGTTTATATAGTGATGGAGTTGTGTGAAGGAGGGGAGCTTTTGGACAGAATACTATCAAGATGTGGGAAATACACAGAAGATGATGCAAAAGCTGTAATGACACAGATACTGAATGTTGTTGCATTTTGCCATCTACAAGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTCTTGTTCACATCCAAGGATGAAAACTCAGAGCTGAAGGCCATAGACTTTGGATTGTCTGATTTTGTAAAACCAGATGAAAGGCTTAATGATATTGTTGGTAGCGCATATTATGTAGCTCCTGAAGTTCTACATCGAACTTACAACATAGAGGCTGATGTCTGGAGTATTGGTGTGATTGCATATATTCTTTTATGCGGCAGCCGTCCATTTTGGGCCCGAACTGAGTCTGGAATCTTTCGTGCTGTATTGAAAGCTGATCCATGTTTTGATGAACCTCCTTGGCCCTCTTTATCAGCTGCAGCAAAAGATTTTGTTAAGCGACTATTAAATAAAGATCCTAGGAAAAGAATGACAGCCGCACAGGCTTTAAGTCATCCATGGATTAAAAATTTTAAGGATGTAAAAGTGCCTCTCGATATTCTAATATTCAAGCTTATGAAGACATATATGCATTCCTCATCCCTACGGAAAGCAGCTTTAAGGGCTCTATCCAAGACGTTAACAATTGATGAACTATTTTATTTGAAGGAGCAATTTGCACTTTTGGAGCCAAACAAAAATGGCACCATAAGCTTGGAAAATATTAAAACGGCTTTGATGAAAAATGCAACAGATGCTATGAAGGAGTCACGCATTCCTGACTTTCTAGCATCACTTAATGCATTGCAGTATAGAAGGATGGATTTTGATGAATTCTGCACAGCTTCACTTAGTGTTCATCAACTTGAGGCCCTTGATCGGTGGGAGCAACATGCACGCTGTGCCTACGAACTTTTTGAAATGGATGGAAACAGGGCTATAGTCATCGAGGAACTAGCTTCGGAGCTTGGCCTTGGTCCATCTGTTCCAGTTCATGCTGTTCTTCATGATTGGATTCGGCACACTGATGGAAAATTAAGCTTCCTAGGATTTGTCAAATTGTTGCATGGTCCATCTCGAAGTCTTGCAAAAGTTCAATAGAAGGGCGCAGTCATACTATCATGATTTGGCCTATAAAATTAAAATGCTGGCTGAGTATCAAGGGATCTTTATCTTTGCTGCCACTATCATGGCTTAGGAGGGGCTTTCTTCTTTTATGAGGCTCGAGCTTGTCTCCAGCTAGAACAGCAACAGGAGTGGAACCTGTTCCTCCAGGCATCAAAATTGAGGCATTTGTATTTTTTTGTATTTT 2126 0.4224 MGLCTSKRSSNLTLSSPNSDTHSPRNNTVPAQVNSLPVNDTSSSANGQNPSNERGKEKNDTENVKKSPLFPFYSPSPSHYLFSKKSPANVSSNSTPKRFFKRPFPPPSPAKHIRAVLARRHGSVKPNEATIPEGSEVEVVSGLDKSFGFSKHFGNKYELGDEVGRGHFGYTCAAKFKKGELKGQQVAVKVIHKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRCGKYTEDDAKAVMTQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRTYNIEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPCFDEPPWPSLSAAAKDFVKRLLNKDPRKRMTAAQALSHPWIKNFKDVKVPLDILIFKLMKTYMHSSSLRKAALRALSKTLTIDELFYLKEQFALLEPNKNGTISLENIKTALMKNATDAMKESRIPDFLASLNALQYRRMDFDEFCTASLSVHQLEALDRWEQHARCAYELFEMDGNRAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKVQ 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00479 610 FunFam CDPK-related kinase 3 149 321 - -
Bach10g00479 610 FunFam Calcium-dependent protein kinase SK5 329 423 - -
Bach10g00479 610 FunFam CDPK-related kinase 1 455 528 - -
Bach10g00479 610 SUPERFAMILY Protein kinase-like (PK-like) 154 450 IPR011009 -
Bach10g00479 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Bach10g00479 610 ProSitePatterns Protein kinases ATP-binding region signature. 163 189 IPR017441 GO:0005524
Bach10g00479 610 CDD STKc_CAMK 156 418 - -
Bach10g00479 610 Gene3D Phosphorylase Kinase; domain 1 150 246 - -
Bach10g00479 610 ProSiteProfiles Protein kinase domain profile. 157 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00479 610 PANTHER SERINE/THREONINE-PROTEIN KINASE 141 585 - -
Bach10g00479 610 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Bach10g00479 610 Gene3D Transferase(Phosphotransferase) domain 1 247 442 - -
Bach10g00479 610 FunFam CDPK-related kinase 1 150 245 - -
Bach10g00479 610 Gene3D - 443 601 - -
Bach10g00479 610 Pfam Protein kinase domain 157 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00479 610 SMART serkin_6 157 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00479 610 MobiDBLite consensus disorder prediction 1 52 - -
Bach10g00479 610 MobiDBLite consensus disorder prediction 1 70 - -
Bach10g00479 610 SUPERFAMILY EF-hand 447 601 IPR011992 -
Bach10g00479 610 MobiDBLite consensus disorder prediction 86 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00479 Bach-Chr10 3442384 3446918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00479 1 610 EF-hand Containing Proteins AT3G50530 74.769 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bach10g00479 Pkinase 1.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00479 K13412 - cave:132186080 1015.76