Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00462 ATGTCGCAGCGATCGATGCCGGCGCCGTTTCTAACGAAGACGTACCAGTTGGTGGATGATCCCGTCTCCGACGATGTGATATCGTGGAGTGAAAGCGGCAACACTTTTGTGGTGTGGAAGCAGGCGGAATTTGCAATGGACTTGCTTCCCAATTACTTCAAGCACAACAACTTCTCTAGCTTTGTCCGCCAGCTTAACACTTATGGGTTCAGAAAGATTGTTCCTGACAAATGGGAATTTGCGAACGAGTATTTCAAGCGTGGACAGAAGGAACTGCTTTCTGAAATCAAACGGCGGAAAACCGTGGGACAAGCGTCAGCTCAGGTGTCCGGGACGGGAAAATCGGGTGGCGCTGATAACTCTGCATCAAACTCGGGCGGTGATGACATGGGGTCGACGTCTACTTCGTCCCCTGATTCGAAGAATCCTGGATCGGTGGAGACTATGACAACTCAATACGCGGAGTTATCAGGTGAAAACAAGAAACTGAAAAAGGATAATGTAATGCTGAGCACGGAGCTGGCGCTAGCGAAGAAGCAGTGCAATGAGCTGATAGGTTTCCTGAAGGATAATCTGAAGGTGGGGCCCGATCAGATCAATCGGATCATGCGGCAAGGAATTAGTGGGTCCAGCCGCGACGAATTAGTTGGTCCGGTGCCTAGTCTTACCGTAGATAATGATAATGACGAAAACGCGGTAGGTGATGAGATTGAGAGGGAAGGTGGAGAAACTTTGAAATTGTTTGGGGTTTACTTGAAAGTGAAGGATGGCGAGGAGAAAATCTCCAACAAGAGAAGGCGTCGAGACCAAATGGTCTTGAGTGGGCCTTGCCCTCACTCCGACAAGTTTAAGGCTGTTCCGGTGAATGCGATGATCAAGAGTAGCAAGGTCTGCAACTGA 900 0.4933 MSQRSMPAPFLTKTYQLVDDPVSDDVISWSESGNTFVVWKQAEFAMDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANEYFKRGQKELLSEIKRRKTVGQASAQVSGTGKSGGADNSASNSGGDDMGSTSTSSPDSKNPGSVETMTTQYAELSGENKKLKKDNVMLSTELALAKKQCNELIGFLKDNLKVGPDQINRIMRQGISGSSRDELVGPVPSLTVDNDNDENAVGDEIEREGGETLKLFGVYLKVKDGEEKISNKRRRRDQMVLSGPCPHSDKFKAVPVNAMIKSSKVCN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00462 299 Coils Coil 146 180 - -
Bach10g00462 299 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach10g00462 299 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach10g00462 299 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach10g00462 299 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 206 IPR027725 -
Bach10g00462 299 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Bach10g00462 299 MobiDBLite consensus disorder prediction 210 230 - -
Bach10g00462 299 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach10g00462 299 MobiDBLite consensus disorder prediction 103 147 - -
Bach10g00462 299 FunFam Heat stress transcription factor B-4 2 100 - -
Bach10g00462 299 Gene3D - 2 101 IPR036388 -
Bach10g00462 299 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach10g00462 299 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00462 Bach-Chr10 3257717 3259469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00462 2 299 HSF AT4G36990 52.318 4.12e-84 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bach10g00462 HSF_DNA-bind 7.4e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00462 K09419 - qsa:O6P43_033819 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00524 4 3528602 3531083 Bach10g00462 10 3257717 3259469 BWGD
Bach10g00462 10 3257717 3259469 Bach10g00462 10 3257717 3259469 ECH