Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00456 ATGGATGTGGACACAGTGAAAACTTCAGCAGGGGACAACAGCATGGACGTGATGGCAATGATGATGCAAATGGAAAAGTTCCCTGAATTCTGTGAACCTTTTTATAACACTCCCACTTTCCCAGAGACCGATTTCTCGGGTAGTGGAAGTGGAAGTTCCACCAGCATTACTCCCACTCTGCCCATGTTCCAAAACCCAACTTTGATTAATCCTCCACTACCTTGCTCAGCTAATAATTTCGTTAACAATCCAATTCAGCAACCAGCGACACCTCCCCTTCAACCCAATGAGGTTCCATTGAGACTGAAGAGTCCCAACACTTCATTTCCCTACCCATCATCATCATCAGAGAAGAGAAACTCTATGGCAGCCATGAGAGAAATGATATTCCGAATAGCAATGATGCAACCGATACATATTGACCCAGAATCTATTAAGCCACCGAAGAGACGAAACATGAAGGTTTCAAAGGACCCACAGAGTGTAGCAGCGAGACACAGAAGGGAAAGGATAAGTGAGAGGATAAGGATTCTTCAGAGATTAGTCCCTGGTGGAACGAAAATGGACACGGCTTCCATGTTAGACGAAGCAATACATTACGTGAAGTTCTTGAAGAAACAGGTGCAGACGCTGGAACAAGCAGGGGCTAGCAGGCCAGTGAGTGTTGGTTTCCCGGCGATGTCCAATGTTAACGCCAATGTGAATTATTCTGCTTTATTCAAGAGTTTCCAACCTCCTCATCAAATGCTAGGTTCTATGCAAATGCTCAGCTAG 774 0.4509 MDVDTVKTSAGDNSMDVMAMMMQMEKFPEFCEPFYNTPTFPETDFSGSGSGSSTSITPTLPMFQNPTLINPPLPCSANNFVNNPIQQPATPPLQPNEVPLRLKSPNTSFPYPSSSSEKRNSMAAMREMIFRIAMMQPIHIDPESIKPPKRRNMKVSKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRPVSVGFPAMSNVNANVNYSALFKSFQPPHQMLGSMQMLS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00456 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 215 IPR036638 GO:0046983
Bach10g00456 257 Coils Coil 194 214 - -
Bach10g00456 257 MobiDBLite consensus disorder prediction 143 167 - -
Bach10g00456 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 204 IPR011598 GO:0046983
Bach10g00456 257 FunFam BHLH transcription factor 158 221 - -
Bach10g00456 257 Gene3D - 153 219 IPR036638 GO:0046983
Bach10g00456 257 CDD bHLH_AtIND_like 156 212 - -
Bach10g00456 257 MobiDBLite consensus disorder prediction 42 119 - -
Bach10g00456 257 MobiDBLite consensus disorder prediction 42 87 - -
Bach10g00456 257 Pfam Helix-loop-helix DNA-binding domain 164 204 IPR011598 GO:0046983
Bach10g00456 257 MobiDBLite consensus disorder prediction 142 167 - -
Bach10g00456 257 SMART finulus 161 210 IPR011598 GO:0046983
Bach10g00456 257 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 15 244 IPR045843 GO:0003700|GO:0006355
Bach10g00456 257 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00456 Bach-Chr10 3211666 3212439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00456 12 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 50.000 3.86e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach10g00456 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00456 - - qsa:O6P43_033826 313.153