Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00454 ATGGACTGGCTGCGAGGAGACTCAGTTGGAAGGGGGAGCTTTGCTACCGTCAATTTAGCCGTTTGCTCTCAGTTTACTTCTCCGATGGTCGTCAAGTCCTCTGATGTTTTCAGCTGTTCTTCGCTGAAGAACGAGAAACAAGTCTTGGATTGTCTTGGAGTTTGCCCAGAAATTATCAGGTGCTTCGGCGATGATTATACCACTGAAGACGGGGAGAGTTTTTATAATTTGTTTTTGGAATATGCTAGTGGTGGTAATCTTTTTGATCAGCTCAAGAATCGCGGTGGTCGGTTACCGGAATCTGACGCTCGACGATACACGAGATCGATAATCAAAGGGCTCGCTTATATTCACGACAAAGGGTTCGTCCACTGCGACATAAAGCTTCAAAACATTCTCGTGTTGGGCAATGGGGATGTTAAAATTGCGGATTTCGGGTTGGCGAAGAGAACAGGGGAAAAACAGAGCAAGTGCGAGTTGAGGGGAACTCCTCTGTCTATGTCACCGGAATCAGTAAACGACAACGAATATGAATCTCCAACAGACGTGTGGGCTCTCGGCTGTGCAGTGATAGAGATGATGACCGGAAAACCCGCTTGGGATGTCGAGAACGGATCGAATATTTTCTCCTTGATGCTTCGAATTGGAGGAGGAGACGAATTGCCGGAAGTTCCTAATGAATTGTCAGAAGAAGGAAAAGATTTTCTATCAAAGTGTTTCGTGAAGGATCCCAGTAAAAGATGGACAGCCGAGATGCTTCTGAAGCATCCCTTTGTCGCCGACGACAGTCTCTCATCAAAAACGTCATCACCCAGGTGTCACTTCGATTTCCCAGATTGGTTTTCGAGCGGAACGGCATCGGTTCTCTGTTCGCCAGAATCAGACCAGTGTTCTGAATGGAAATTCAATTCCATGTGTTCGTCAAATTGCTCTTCAACGATGGATCGCCTTGGGCAGCTAGTTACGGGTAAGAAACCCAATTGGTCAGAATCAGACAGCTGGTATATGGTGAGGTGA 1017 0.4661 MDWLRGDSVGRGSFATVNLAVCSQFTSPMVVKSSDVFSCSSLKNEKQVLDCLGVCPEIIRCFGDDYTTEDGESFYNLFLEYASGGNLFDQLKNRGGRLPESDARRYTRSIIKGLAYIHDKGFVHCDIKLQNILVLGNGDVKIADFGLAKRTGEKQSKCELRGTPLSMSPESVNDNEYESPTDVWALGCAVIEMMTGKPAWDVENGSNIFSLMLRIGGGDELPEVPNELSEEGKDFLSKCFVKDPSKRWTAEMLLKHPFVADDSLSSKTSSPRCHFDFPDWFSSGTASVLCSPESDQCSEWKFNSMCSSNCSSTMDRLGQLVTGKKPNWSESDSWYMVR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00454 338 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Bach10g00454 338 Gene3D Phosphorylase Kinase; domain 1 1 88 - -
Bach10g00454 338 SMART serkin_6 3 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00454 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Bach10g00454 338 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 301 - -
Bach10g00454 338 CDD STKc_MAPKKK 2 259 - -
Bach10g00454 338 SUPERFAMILY Protein kinase-like (PK-like) 3 293 IPR011009 -
Bach10g00454 338 Gene3D Transferase(Phosphotransferase) domain 1 89 277 - -
Bach10g00454 338 Pfam Protein kinase domain 7 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00454 338 ProSiteProfiles Protein kinase domain profile. 3 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00454 Bach-Chr10 3200446 3201462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00454 1 338 MAP Kinase Kinase Kinase AT4G36950 54.000 1.06e-124 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bach10g00454 Pkinase 3.4e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00454 - - pcin:129311745 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00516 4 3465100 3466116 Bach10g00454 10 3200446 3201462 BWGD
Bach10g00454 10 3200446 3201462 Bach10g00454 10 3200446 3201462 ECH