Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00444 GCTGCCGTGTCTTCTACTCGTTAGATTTTTCAGTTTTCATGAAGATTCACTCTCTCTCTATTTGATTTAGATTTGATAGAAAATAATTTCAGAAAAAGAGAGAGTTTTTTTAGCAGAGATGGACGGTGAAGGAGGAAGAGGAGGGGCGCGCGACAGAGAAATTTCCTCCAGGAAGAGAGGAGTTGAAAGTGAGAGAAGGTTCAAAGGGATTAGGATGAGGAAGTGGGGTAAGTGGGTTGCTGAGATTAGGGAGCCCAATAAGCGTTCTAGGATTTGGCTAGGTTCCTACTCCACGCCGGTAGCGGCGGCGAGGGCATACGATACGGCTGTGTTTTATCTCAGGGGTCCATCTGCGAGGCTTAATTTCCCGGAGCTTCTGGTTGGAGAAGGGGGTGGTGTTGGCGGTGATGACATGTCGGCTGCTTCGATAAGGAAGAAAGCCACAGAAGTTGGTGCTAGGGTGGATGCACTTCAAGCTGCTCTCCACCACCATCATCACCATGTTTCGGCGGCACCGGAGCTCATGTCACGAAGTGGTTCTGCCAGCGAGTTTTTTGAACGGGTTGACCTTAATAAGATACCCGAACCCGAGAATTCGGACGGTGACTGGGGAAGGAGTTAGATGGACGGTGAAGGAGGAAGAGGAGGGGCGCGCGACAGAGAAATTTCCTCCAGGAAGAGAGGAGTTGAAAGTGAGAGAAGGTTCAAAGGGATTAGGATGAGGAAGTGGGGTAAGTGGGTTGCTGAGATTAGGGAGCCCAATAAGCGTTCTAGGATTTGGCTAGGTTCCTACTCCACGCCGGTAGCGGCGGCGAGGGCATACGATACGGCTGTGTTTTATCTCAGGGGTCCATCTGCGAGGCTTAATTTCCCGGAGCTTCTGGTTGGAGAAGGGGGTGGTGTTGGCGGTGATGACATGTCGGCTGCTTCGATAAGGAAGAAAGCCACAGAAGTTGGTGCTAGGGTGGATGCACTTCAAGCTGCTCTCCACCACCATCATCACCATGTTTCGGCGGCACCGGAGCTCATGTCACGAAGTGGTTCTGCCAGCGAGTTTTTTGAACGGGTTGACCTTAATAAGATACCCGAACCCGAGAATTCGGACGGTGACTGGGGAAGGAGTTAGAAGATGACGTATCCCTCTTCGTCACTCTTCCACCTCTTTTTCTTTCCTCCTCGCCCACGAGAGGATGGTTGCTAACCTACGCCATGGAGGATTATGCGACGGCTGGACTGGAGCAAAGTGATGTCGATGAGGCTTTTTGATGTGGATTAGTGGACTGTATCTTTTTTTTTTTTTTCTTCTTCTCCTTCTCATACCCTTTTATTTGAGTAGCCTTTCTAATTTAGATTTCAAGAAGAAATTTTGGCGTTGTAAAAATCTTAAATTGTATATTAACTAGTAATTAACCTCTTTTCA 1420 0.4866 MDGEGGRGGARDREISSRKRGVESERRFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLVGEGGGVGGDDMSAASIRKKATEVGARVDALQAALHHHHHHVSAAPELMSRSGSASEFFERVDLNKIPEPENSDGDWGRS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00444 167 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Bach10g00444 167 MobiDBLite consensus disorder prediction 148 167 - -
Bach10g00444 167 FunFam Ethylene-responsive transcription factor 2 26 85 - -
Bach10g00444 167 Pfam AP2 domain 27 76 IPR001471 GO:0003700|GO:0006355
Bach10g00444 167 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 15 161 - -
Bach10g00444 167 MobiDBLite consensus disorder prediction 149 167 - -
Bach10g00444 167 CDD AP2 27 84 IPR001471 GO:0003700|GO:0006355
Bach10g00444 167 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Bach10g00444 167 Gene3D AP2/ERF domain 26 85 IPR036955 GO:0003700|GO:0006355
Bach10g00444 167 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Bach10g00444 167 PRINTS Ethylene responsive element binding protein signature 66 86 IPR001471 GO:0003700|GO:0006355
Bach10g00444 167 SUPERFAMILY DNA-binding domain 27 85 IPR016177 GO:0003677
Bach10g00444 167 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00444 Bach-Chr10 3107229 3108144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00444 15 163 AP2-EREBP Transcription Factor Family AT2G23340 65.605 4.19e-60 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach10g00444 AP2 2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00444 K09286 - qsa:O6P43_033843 221.861