Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00440 ATGCCTTGTTCCGGAACACTATTCTCTGTCTTGTTCTTTTACTTTACTCTCACCTCTGCTTACCTCTCTGCCGTCATCGCCGACGTGTTCGGTGGCGTCCCCGACCAATTTCCACCAGTGACGAACTTGCTGCTACCATCCGACGCCGTTTCTTTGCTGTCTTTCAAATCGAAATCGGACCTAGATAACAAGCTTCTCTACGACCTCCATGAGCGCTACGATTACTGCCAATGGCAGGGAGTGAAATGTGCTCAAGGCAGAGTGGTTCGCTTCGTTCTTCAAGACTTTGGTCTCCGTGGCCTCTTTGCTCCCAACACCTTGACTCGCCTTGACCAGCTCCGAGTCATGAGTCTCCGTAACAACTCGCTCTTTGGTCCGATTCCGGATCTCTCTGGGCTCTTCAATCTCAAGTCTCTCTTCCTCGACCACAATTTCTTCACAGGTTCTTTCCCCCCTTCAATTTTGTTGCTTCATCGCCTCCTCACTCTTTCCCTCTCGCATAACAATCTCACCGGTTTAATCCCGGTTGAGTTAGCCGTTTTGGACCGGCTTATTTCTCTTCGGCTTGAATCCAACTGGTTCAATGGTAGCATTCCGCCGTTGAACCAGTCCTCGCTTCGAGTCTTCAATGTATCTAACAACAACTTCACCGGGGCTATTCCGGTAACGCCGACTCTTGCTCGCTTCGAAGCGGCATCGTTTTTGGGGAATCCAGGTCTCTGCGGGGAGATCATCCACCGAGCATGTGACCCACAATCTCGATTCTTCGGTTCCACCAATGATAGTTCCTCCGCGGCGCCACTCGGGCAAAGCGTAGAATCACAAGGCATCGTTGTAGTACCTTCACCCAATGAAAAGAAGAAGCATAAAGGTACCGGGTTGATTCTTGGGTTCACTATTGGGGTATCGGTACTCATTGCTTCTGTTCTCTGCGTCATCGCATTGGTTAGAAAACAGAACACTTCAGGAAAACTGGAAGGCCCGAAAATGCAGTCATCTCAAACCATGAATGCTGTTCCGGCAACTTCCGTTGCCCAAACTCAGGCTGAGCAAAATAGTGAATTTAATGCTAAGGCAAAGAAAATTGAGGAAATTCAACGAGTTCATAAGAGTGGGAATTTGGTATTCTGTAGTAGGGAGGCGCAGTTGTATACACTTGACCAGTTAATGAGGGCCTCGGCAGAGTTACTGGGTAGGGGCACGATTGGGACTACGTACAAGGCAGTGCTGGATGGGCAGCTTATATTAACGGTGAAGAGATTGGATGCTGGTAAAACTGTAATAACGAGCAGTGAATTGTTCGAGCAGCATATGGAAATGGTGGGAGAGCTTCGGCATCCAAATTTGGTTCCAGTTAGAGCTTATTTTCAAGCTAAAGGAGAGAGGCTTGTGATATATGACTATCAGCCCAATGGTAGCCTCTTCAATCTCATTCATGGTTCAAGATCAACAAGAGCGAAGCCGCTTCACTGGACATCTTGCTTAAAGATAGCTGAGGATGTTGCACTTGGACTTGCTTATATACATCAAGCCTCAAGATTAATACACGGCAACCTAAGGTCATCTAATGTTCTCCTAGGAGTGGACTTTGAAGCTTGTGTAACAGACTATGGTTTAGCCTTTCTTGCAGACACTTCTTCCATTGAAGATCCTGATTCTGCAGCCTACAAGGCCCCGGAGACCCGCAAGTCCAGCCGCCGAGCCTCTCCGAAATCCGATGTCTTTGCCTTTGGGGTACTTCTATTGGAGCTTCTAACGGGCAAACACCCTTCTCAACACCCTTTCCTTGTGCCCACGGATTTGCAAGATTGGGTTAGAGCAATGAGAGATGATGATGGCACTGAAGATAATCGCCTGGGAATGCTCACCGAGGTTGCAAGTATTTGCAGTGCCACATCACCTGAACAAAGACCGGCAATGTGGCAAGTCTTGAAGATGATACAGGAAATAAAGGAGAGTGTGACAATGGAGGACACTGTCACTGTCTAA 1989 0.4801 MPCSGTLFSVLFFYFTLTSAYLSAVIADVFGGVPDQFPPVTNLLLPSDAVSLLSFKSKSDLDNKLLYDLHERYDYCQWQGVKCAQGRVVRFVLQDFGLRGLFAPNTLTRLDQLRVMSLRNNSLFGPIPDLSGLFNLKSLFLDHNFFTGSFPPSILLLHRLLTLSLSHNNLTGLIPVELAVLDRLISLRLESNWFNGSIPPLNQSSLRVFNVSNNNFTGAIPVTPTLARFEAASFLGNPGLCGEIIHRACDPQSRFFGSTNDSSSAAPLGQSVESQGIVVVPSPNEKKKHKGTGLILGFTIGVSVLIASVLCVIALVRKQNTSGKLEGPKMQSSQTMNAVPATSVAQTQAEQNSEFNAKAKKIEEIQRVHKSGNLVFCSREAQLYTLDQLMRASAELLGRGTIGTTYKAVLDGQLILTVKRLDAGKTVITSSELFEQHMEMVGELRHPNLVPVRAYFQAKGERLVIYDYQPNGSLFNLIHGSRSTRAKPLHWTSCLKIAEDVALGLAYIHQASRLIHGNLRSSNVLLGVDFEACVTDYGLAFLADTSSIEDPDSAAYKAPETRKSSRRASPKSDVFAFGVLLLELLTGKHPSQHPFLVPTDLQDWVRAMRDDDGTEDNRLGMLTEVASICSATSPEQRPAMWQVLKMIQEIKESVTMEDTVTV 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00440 662 Gene3D Ribonuclease Inhibitor 203 249 IPR032675 -
Bach10g00440 662 ProSiteProfiles Protein kinase domain profile. 391 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00440 662 Pfam Protein tyrosine and serine/threonine kinase 395 645 IPR001245 GO:0004672|GO:0006468
Bach10g00440 662 FunFam Probable inactive receptor kinase At5g67200 47 157 - -
Bach10g00440 662 SUPERFAMILY Protein kinase-like (PK-like) 395 651 IPR011009 -
Bach10g00440 662 Gene3D Transferase(Phosphotransferase) domain 1 470 661 - -
Bach10g00440 662 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 652 IPR046959 -
Bach10g00440 662 Gene3D Phosphorylase Kinase; domain 1 354 468 - -
Bach10g00440 662 FunFam Leucine-rich repeat receptor-like protein kinase 159 251 - -
Bach10g00440 662 SUPERFAMILY L domain-like 46 242 - -
Bach10g00440 662 Gene3D Ribonuclease Inhibitor 46 202 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00440 Bach-Chr10 3078903 3081595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00440 39 658 Receptor kinase-like Gene Family AT3G50230 54.673 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bach10g00440 PK_Tyr_Ser-Thr 1.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00440 - - qsa:O6P43_034522 941.414