Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00425 CTCCTCTCTCTTTCAACATAAGCAAACTCGTTTTTCTTCGATTTGGTTTTCTAGGAACCAGTTCTCCTTCATTTTTATGTGAGCATAAAAATTTGAAGCAGTAGATGAGTATGGCGGCTAGCAGAAAGGAAATGGATCGGATCAAAGGCCCTTGGAGTCCTGAAGAGGATGATGCTCTGCATAAGCTGGTAGAGAAGCATGGACCCAGGAACTGGTCTTTGATCAGCAAATCCATTCCCGGTCGTTCTGGGAAATCCTGCAGGCTTCGTTGGTGTAATCAGCTATCTCCTCAGGTGGAGCATCGCGCCTTCTCACCCGAAGAGGACGAAACCATCATCAGAGCTCATGCCCGTTTCGGCAACAAATGGGCCACCATCGCCCGTCTTCTATCTGGGCGCACCGATAACGCTATCAAGAATCACTGGAACTCCACCTTGAAGCGCAAGTGTGCTTCCATGATGATCGATGAAAATGGCGTGGGTGCGCCTGGTTATGACTGCAGTTATAGCCAGCGACCTCTCAAGAGGTCGGTTAGTGCTGGTGCTGCAATTCCTGTCTCCACAGGGTTTCATATGAACCCATCCTCTCCAGGTAGCCCTTCGGGATCCGATGTTAGCAATTCCAGTGTTCCTGTTGCGTCTTCTTCCCATGTATACCGACCTGTTCCTCGAACCGGCGGGGTTCTACCTCCTGTAGAAACAACGTCGTCTTCTAACGACCCTCCAACATCATTGTCGTTGTCCCTTCCTGGTGTAGATTCCTGCGAGGTCTCGAATCGGCCTACAGAGTCGACAAACACAGTGCCGCTGGCAAACACCATGCCTTTGTTACCGGTCATGTCCCCAACGCCGGCACCGACTTCAACCCCGGCCCCCTTAGCATCTCAGATGTCGATGCAACATCTGCTTCAGCTTGGTCGCGATGATCGGGGCGGTGAGTGTGGTTCATCATCGGCTGTGACGCAGAAGGGCTTCGTACAGGTGCCATTGAATTTCAGTTCTGAGCTGCTAGGCGTGATGCAGGAAATGATAAGGAAGGAGGTGAGGAATTATATGGCGGAGCAGAATGGCAAGTGTTTTCAGGCAGCTGATGATGGCTTTAGGAACGCTTCGGTGAAGCGTATCGGGATTAGCAGGATCGATTCGTAAATGAGTATGGCGGCTAGCAGAAAGGAAATGGATCGGATCAAAGGCCCTTGGAGTCCTGAAGAGGATGATGCTCTGCATAAGCTGGTAGAGAAGCATGGACCCAGGAACTGGTCTTTGATCAGCAAATCCATTCCCGGTCGTTCTGGGAAATCCTGCAGGCTTCGTTGGTGTAATCAGCTATCTCCTCAGGTGGAGCATCGCGCCTTCTCACCCGAAGAGGACGAAACCATCATCAGAGCTCATGCCCGTTTCGGCAACAAATGGGCCACCATCGCCCGTCTTCTATCTGGGCGCACCGATAACGCTATCAAGAATCACTGGAACTCCACCTTGAAGCGCAAGTGTGCTTCCATGATGATCGATGAAAATGGCGTGGGTGCGCCTGGTTATGACTGCAGTTATAGCCAGCGACCTCTCAAGAGGTCGGTTAGTGCTGGTGCTGCAATTCCTGTCTCCACAGGGTTTCATATGAACCCATCCTCTCCAGGTAGCCCTTCGGGATCCGATGTTAGCAATTCCAGTGTTCCTGTTGCGTCTTCTTCCCATGTATACCGACCTGTTCCTCGAACCGGCGGGGTTCTACCTCCTGTAGAAACAACGTCGTCTTCTAACGACCCTCCAACATCATTGTCGTTGTCCCTTCCTGGTGTAGATTCCTGCGAGGTCTCGAATCGGCCTACAGAGTCGACAAACACAGTGCCGCTGGCAAACACCATGCCTTTGTTACCGGTCATGTCCCCAACGCCGGCACCGACTTCAACCCCGGCCCCCTTAGCATCTCAGATGTCGATGCAACATCTGCTTCAGCTTGGTCGCGATGATCGGGGCGGTGAGTGTGGTTCATCATCGGCTGTGACGCAGAAGGGCTTCGTACAGGTGCCATTGAATTTCAGTTCTGAGCTGCTAGGCGTGATGCAGGAAATGATAAGGAAGGAGGTGAGGAATTATATGGCGGAGCAGAATGGCAAGTGTTTTCAGGCAGCTGATGATGGCTTTAGGAACGCTTCGGTGAAGCGTATCGGGATTAGCAGGATCGATTCGTAAATATCAGAGAATGGAACAGAATAGGGGGCGAGAAAATGAGCGAGAGGGAGGAAAAAAAAAATTGAAGCTTTTTCCTTTTATTTTTTCGTGTCTTTAGGCAATAATTTTGTTCATTGTACAGCGAGAGGTTGGTCAGTACTAGGTTATGGGATGGAATTAATTAATTAATTCCTGAGAAGCAGAGAAATCCGGAGGGATGTCACTCAAGGAAGGAATGGGGGGGAGCAAGCATAAAAATTTCATCAAATTTGCTGTCGTAGTTCTGTTCC 2461 0.5047 MSMAASRKEMDRIKGPWSPEEDDALHKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFSPEEDETIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMMIDENGVGAPGYDCSYSQRPLKRSVSAGAAIPVSTGFHMNPSSPGSPSGSDVSNSSVPVASSSHVYRPVPRTGGVLPPVETTSSSNDPPTSLSLSLPGVDSCEVSNRPTESTNTVPLANTMPLLPVMSPTPAPTSTPAPLASQMSMQHLLQLGRDDRGGECGSSSAVTQKGFVQVPLNFSSELLGVMQEMIRKEVRNYMAEQNGKCFQAADDGFRNASVKRIGISRIDS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00425 347 FunFam Transcription factor MYB44 68 114 - -
Bach10g00425 347 MobiDBLite consensus disorder prediction 154 180 - -
Bach10g00425 347 MobiDBLite consensus disorder prediction 154 234 - -
Bach10g00425 347 MobiDBLite consensus disorder prediction 195 234 - -
Bach10g00425 347 CDD SANT 68 111 IPR001005 -
Bach10g00425 347 Gene3D - 67 124 - -
Bach10g00425 347 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bach10g00425 347 SMART sant 13 62 IPR001005 -
Bach10g00425 347 SMART sant 65 113 IPR001005 -
Bach10g00425 347 PANTHER MYB PROTEIN-RELATED 14 201 - -
Bach10g00425 347 FunFam MYB transcription factor 14 65 - -
Bach10g00425 347 Gene3D - 13 65 - -
Bach10g00425 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Bach10g00425 347 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Bach10g00425 347 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Bach10g00425 347 Pfam Myb-like DNA-binding domain 17 75 - -
Bach10g00425 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 115 IPR017930 -
Bach10g00425 347 CDD SANT 16 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00425 Bach-Chr10 2989395 2990811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00425 6 346 MYB Transcription Factor Family AT4G37260 50.276 1.61e-99 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach10g00425 Myb_DNA-bind_6 3.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00425 K09422 - qsa:O6P43_024595 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00425 10 2989395 2990811 Bach4g00485 4 3257293 3258315 BWGD
Bach4g00485 4 3257293 3258315 Bach10g00425 10 2989395 2990811 ECH
Bach10g00425 10 2989395 2990811 Bach10g00425 10 2989395 2990811 ECH