Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00419 ATGACTTTCTGCAGGGAAGAAGGTGATATATCACCAAATAACAAGCTAGGTATTAATGGTGGATCCATTAACACAGAAAGTGTGGCTGAAGAGGATAACTCAAGGGCATGGTTGAGTTTAGGGCTCAATGGAGCTGAAAACCCAGAGTCCCCATCAAAACCTCTCAGCAATAAGGTATTCTCGTGCAATTTCTGCATAAGAAAGTTTTATAGCTCACAAGCCTTGGGTGGTCACCAGAATGCCCACAAGAGGGAAAGAGGAGCAGCTAGAAGGTACCAATCTCATAGGATGGTCATGACAACAACGGGGTTTCCTTGCACATCTGTAGCAGCGAGGTCATTGGGTGTGCAGCCACACTCGCTTGTGCACAAGCCAGCCAGAGATGGCTCTGCTATGATTGCTAGATTTAGTGATTCCATTGCTGGGTTTGGAATGGCTTGGACACCCTTTATGCTAGAACAACCCATGGCTTTGATTTGGCCTGGGAGCTTTCGGGTGGACAACTTGCAAAAGCAAGAATTGGATGTGAAGAAGCTCGATTTGGATCTTCGACTTTGA 558 0.4624 MTFCREEGDISPNNKLGINGGSINTESVAEEDNSRAWLSLGLNGAENPESPSKPLSNKVFSCNFCIRKFYSSQALGGHQNAHKRERGAARRYQSHRMVMTTTGFPCTSVAARSLGVQPHSLVHKPARDGSAMIARFSDSIAGFGMAWTPFMLEQPMALIWPGSFRVDNLQKQELDVKKLDLDLRL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00419 185 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 87 IPR013087 -
Bach10g00419 185 SUPERFAMILY beta-beta-alpha zinc fingers 56 86 IPR036236 -
Bach10g00419 185 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 185 - -
Bach10g00419 185 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Bach10g00419 185 Gene3D Classic Zinc Finger 48 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00419 Bach-Chr10 2938994 2939551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00419 6 165 C2H2 Transcription Factor Family AT1G24625 34.940 2.30e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00419 - - tcc:18611223 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00419 10 2938994 2939551 Bach10g00419 10 2938994 2939551 ECH