Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00417 ATGCCTCCTCAAGATCAAGAACAACCGCTGTTAGTCGACTCGCGCCAAGAGGAGCTAGAAGAAACCGCTTATGATTCCTCCGAGAAGATCGTGATTGTTGGAATTGACGATGTAGATATCGACAATTGTTCTCGAGCGCCACCGTTCTCATGGAGGAAACTCTGGCTCTTTACTGGCCCTGGTTTTCTTATGAGCATCGCATTTCTCGATCCTGGGAACCTGGAGGGAGATCTTCAGTCCGGTGCAATTGCTGGGTATTCGCTGTTATGGTTGCTCATGTGGGCTACAGCCATGGGCCTTCTTGTTCAGCTTTTGGCGGCGCGGCTCGGAGTGGCAACTGGAAAGCACTTGGCTGAATTGTGCAGGGAGGAGTACCCTACTTGGGCTTCGATGGTGCTGTGGGTGATGGCAGAATTAGCTCTAATTGGAGCTGACATTCAAGAGGTTATTGGGAGCGCTATTGCGATAAGAATTCTAAGTAATGGGTTTGTCCCCCTTTGGGCAGGGGTCACCATTACGGCTTGCGATTGTTTTATATTTCTGTTTCTTGAGAACTATGGTGTGAGGAAACTGGAAGCATTTTTTGCCGTTCTCATTGCCATAATGGCAATCTCATTTGCATGGATGTTTGGTGAAACAAAACCCAGTGGCATAGATCTTCTTCTAGGTATCTTGATTCCTAAACTTAGCTCCAAAACAATACAGCAGGCAGTTGGAGTTGTGGGTTGCATTATTATGCCTCACAATGTATTCTTGCACTCTGCTCTTGTTCAATCAAGGCAAATTGACCGCACCAAGAAAGGCCGAGTTCAAGAAGCTCTTAACTATTACTCTATAGAGTCCGCTGTCGCCCTTGTGGTTTCTTTTATAATTAACTTATTTGTTACAACTGTGTTTGCAAAGGCGTTTTATGGTACTGAACTAGCAAATAGCATTGGCCTTGTTAATGCGGGGCAATATCTTCAGGAGAAGTATGGGGGTGGATTTCTCCCAATTTTATATATATGGGGCATTGGGTTATTAGCAGCTGGCCAAAGTAGCACTATTACTGGGACTTATGCTGGACAATTTATCATGGGGGGTTTCCTAAACTTAAGGTTGAAAAAATGGGTGAGGGCATTAATTACACGAAGTTTTGCTATCATTCCAACCATGATAGTTGCTCTTGTCTTTGATACCTCAGAAGACTCGTTAGATGTTCTCAATGAATGGCTTAATATTCTCCAGTCAGTTCAGATTCCCTTTGCGCTCATTCCCTTGCTTTGCTTGGTGTCAAAGGAGCAGATAATGGGCACTTTCAAAATTGGCTCTGTCCTCAAGATTTTTGCATGGCTTGTGGCTGCCCTGGTCATAGTAATAAATGGCTATCTTTTGGTGGAATTCTTCTCCTCTGAAGTGAATGGAGCAGCGATTGGCACTGTAGTATGTGCCTTCACAGTTGCATATGGTCTGTGGTCAGTGTTCGGGGGATTCGAGTTAGCTTCTCAAAGAATCGTCCGGGAGCTGATGGTCATATCTCTCTGTTACGGATACGCATCGGCCTTCTTTGCTAGTCCTTTCCTCGGCTTGCTTTCGGATTTAATTGTGCTTGGGTTATTGATAGCAGCTGGTAGCATGCATGCCTTGAAGCAATGTGGAAAGCAACCGTATCACAACTGGCATAAACAGCGAATGCCTACCCCTTTCGCAGGGTTTGGTAGTGGTGCATGTCTACCTTCCTAA 1722 0.4524 MPPQDQEQPLLVDSRQEELEETAYDSSEKIVIVGIDDVDIDNCSRAPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATAMGLLVQLLAARLGVATGKHLAELCREEYPTWASMVLWVMAELALIGADIQEVIGSAIAIRILSNGFVPLWAGVTITACDCFIFLFLENYGVRKLEAFFAVLIAIMAISFAWMFGETKPSGIDLLLGILIPKLSSKTIQQAVGVVGCIIMPHNVFLHSALVQSRQIDRTKKGRVQEALNYYSIESAVALVVSFIINLFVTTVFAKAFYGTELANSIGLVNAGQYLQEKYGGGFLPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWVRALITRSFAIIPTMIVALVFDTSEDSLDVLNEWLNILQSVQIPFALIPLLCLVSKEQIMGTFKIGSVLKIFAWLVAALVIVINGYLLVEFFSSEVNGAAIGTVVCAFTVAYGLWSVFGGFELASQRIVRELMVISLCYGYASAFFASPFLGLLSDLIVLGLLIAAGSMHALKQCGKQPYHNWHKQRMPTPFAGFGSGACLPS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00417 573 Hamap Divalent metal cation transporter MntH [mntH]. 30 462 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach10g00417 573 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 52 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach10g00417 573 NCBIfam Nramp family divalent metal transporter 59 428 - -
Bach10g00417 573 PRINTS Natural resistance-associated macrophage protein signature 188 209 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach10g00417 573 PRINTS Natural resistance-associated macrophage protein signature 237 260 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach10g00417 573 PRINTS Natural resistance-associated macrophage protein signature 163 182 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach10g00417 573 PRINTS Natural resistance-associated macrophage protein signature 372 389 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach10g00417 573 PRINTS Natural resistance-associated macrophage protein signature 344 363 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach10g00417 573 PRINTS Natural resistance-associated macrophage protein signature 406 425 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach10g00417 573 PRINTS Natural resistance-associated macrophage protein signature 133 159 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach10g00417 573 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 46 491 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bach10g00417 573 Pfam Natural resistance-associated macrophage protein 75 436 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00417 Bach-Chr10 2915867 2922855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00417 21 482 Inorganic Solute Cotransporters AT1G47240 79.698 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00417 K21398 - qsa:O6P43_024584 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00417 10 2915867 2922855 Bach10g00417 10 2915867 2922855 ECH