Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00398 ATGAGTTGCAACGGTTGCCGAGTTCTTCGAAAGGGTTGCAGCGAGTCCTGTATTCTTCGCCCTTGTTTGCAGTGGATCGAGAGCCCTGAAGCTCAAGGCCATGCCACCGTCTTTGTAGCCAAGTTTTTTGGCCGAGCTGGCCTCATGTCTTTCATTTCCAACGTCCCTGAAAACCAAAGGCCTGCTCTGTTTCAATCTTTGTTGTTCGAAGCATGTGGGCGAACGGTGAACCCGGTGAATGGTGCTGTAGGGCTTCTATGGACGGGAAACTGGCACGTGTGCCAGGCTGCCGTGGAGACAGTGCTCCGTGGTGGCACTTTAAGGCCCATGCCAGAGTTTCTCGGCCTTGATGCTCCTACTCCGGCCACCGATGAGGCATCCGAAGCGGAGGTCACCTACACGGACATGTGGAGGGTCCGAGATCCGAACCCGAACTCCCAGTTAACGAATTCTCGATCCAACAAGGTGTCTTCGGGCAAACGCCGGCGATCCGATGAGTGTGCGAAACCCCAAAGCAGCGATCTCGATCTCCAATTGACGCCGAGCTTCCTGCAGAAAGTCTCGAGCTACAGCAGCAGACCGGAAATTCGCCGGCCGGGTACGCCGTCGATGAACTCGGAGGAATCCGTCACGACGATGGAGAGTGGCCTTAAAGATCAGTACGCTAATGGCGGAGACCGGAAACTTCTCAACCTTTTTACTTGA 705 0.5504 MSCNGCRVLRKGCSESCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISNVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPEFLGLDAPTPATDEASEAEVTYTDMWRVRDPNPNSQLTNSRSNKVSSGKRRRSDECAKPQSSDLDLQLTPSFLQKVSSYSSRPEIRRPGTPSMNSEESVTTMESGLKDQYANGGDRKLLNLFT 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00398 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 233 - -
Bach10g00398 234 MobiDBLite consensus disorder prediction 188 218 - -
Bach10g00398 234 MobiDBLite consensus disorder prediction 188 225 - -
Bach10g00398 234 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Bach10g00398 234 MobiDBLite consensus disorder prediction 139 174 - -
Bach10g00398 234 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Bach10g00398 234 MobiDBLite consensus disorder prediction 139 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00398 Bach-Chr10 2785161 2785959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00398 1 233 AS2 family AT3G49940 56.977 3.53e-87 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bach10g00398 LOB 3.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00398 - - qsa:O6P43_024565 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00398 10 2785161 2785959 Bach4g00454 4 3037275 3038527 BWGD
Bach4g00454 4 3037275 3038527 Bach10g00398 10 2785161 2785959 ECH
Bach10g00398 10 2785161 2785959 Bach10g00398 10 2785161 2785959 ECH