Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00396 ATGCATAGAGATGTAAAGCCACATAATGTAATGATTGACCATGAGCAACGTAAGCTACGTCTTATAGATTGGGGGCTTGCAGAGTTCTATCATCCTGAAAGAGAATATAATGTTCGCGTTGCCTCGAGATATTTTAAAGGTCCGGAGCTTCTTGTCGATCTTCAAGACTATGATTACTCTTTAGATTTGTGGAGCCTTGGTTGTATGTTTGCTGGAATGATATTCCGCAAGGAGCCATTCTTTTATGGACATGATAACTATGATCAGCTGGTCAAGATTGCTAAGGTACTTGGGACAGATGAGTTTAGTGCATATCTAAACAAGTATCGCATAGAGTTGGATCCACATCTTGCAGCACTTGTGGGGAGGCATAGCCGGAAGCCATGGAGCAAGTTCATTAATGTGGATAATCAACACTTGGCTGTTCCCGAGGCTGTTGACTTTGTTGACAAGTTGTTGCGGTATGATCACCAAGAACGCCCTACCGCGAAAGAAGCAATGGCCCATCCGTACTTCAATCCAATTAGAAATGCAGAAAGCAGTAGAACTCGTGCACACTGA 561 0.4314 MHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPEREYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDEFSAYLNKYRIELDPHLAALVGRHSRKPWSKFINVDNQHLAVPEAVDFVDKLLRYDHQERPTAKEAMAHPYFNPIRNAESSRTRAH 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00396 186 Pfam Protein kinase domain 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00396 186 SMART serkin_6 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00396 186 ProSiteProfiles Protein kinase domain profile. 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00396 186 CDD STKc_CK2_alpha 1 172 IPR045216 GO:0004674|GO:0006468
Bach10g00396 186 PANTHER CASEIN KINASE II SUBUNIT ALPHA 1 181 IPR045216 GO:0004674|GO:0006468
Bach10g00396 186 SUPERFAMILY Protein kinase-like (PK-like) 1 176 IPR011009 -
Bach10g00396 186 Gene3D Transferase(Phosphotransferase) domain 1 1 172 - -
Bach10g00396 186 FunFam Casein kinase II subunit alpha 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00396 Bach-Chr10 2769625 2771809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00396 1 179 Core Cell Cycle Gene Families AT2G38620 30.556 1.22e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Bach10g00396 Pkinase 6.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00396 K03097 - gmx:100817795 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00396 10 2769625 2771809 Bach10g00396 10 2769625 2771809 ECH