Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00386 ATGAAGTACAATCCTAGGGTTTCAAGCTCTCGCCGCAAGAGCCGTAAGGCCCATTTCACGGCGCCGTCAAGCGTTCGCCGTGTTCTGATGAGTGCTCCTCTCTCCAACGACCTCCGCTCTAAGTACAACGTGCGGTCCATGCCGGTTCGCAAGGACGATGAAGTTCAGGTTGTCCGTGGTACCTATAAGGGACGCGAGGGGAAGGTCGTCCAGGTCTACCGCCGTAAATGGGTCATTCATATCGAGAGGATTACACGTGAGAAGGTTAATGGCTCCACTGTAAACGTGGGAATTAACCCATCGAAAGTTGTTATCACCAAGCTGAGGTTGGACAAGGATAGAAAGTCGTTGCTTGATCGCAAGGCCAAGGGACGTGCCGCCGCCGACGACAAGGACAAAGGTGCAAAGTTCACAGCTGAAGACATAATGCAGACTGTGGATTAG 444 0.5248 MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSNDLRSKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAAADDKDKGAKFTAEDIMQTVD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00386 147 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 8 121 IPR005756 GO:0003735|GO:0006412|GO:0015934
Bach10g00386 147 CDD KOW_RPL26 52 105 IPR041988 GO:0003723
Bach10g00386 147 ProSitePatterns Ribosomal protein L24 signature. 52 69 IPR005825 GO:0003735|GO:0005840|GO:0006412
Bach10g00386 147 SUPERFAMILY Translation proteins SH3-like domain 8 125 IPR008991 -
Bach10g00386 147 MobiDBLite consensus disorder prediction 1 20 - -
Bach10g00386 147 Pfam KOW motif 51 82 IPR005824 -
Bach10g00386 147 FunFam 60S ribosomal protein L26 1 145 - -
Bach10g00386 147 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 142 IPR005756 GO:0003735|GO:0006412|GO:0015934
Bach10g00386 147 Hamap 50S ribosomal protein L24 [rplX]. 9 121 IPR005756 GO:0003735|GO:0006412|GO:0015934
Bach10g00386 147 Gene3D - 1 144 IPR014722 -
Bach10g00386 147 SMART kow_9 48 75 IPR005824 -
Bach10g00386 147 NCBIfam 50S ribosomal protein L24 8 122 IPR005756 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00386 Bach-Chr10 2698565 2699008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00386 1 147 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 87.075 5.37e-92 261