Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00383 ATGGGGAAGAAGCAGCATAGCAAAGATAGGATGCTCTCGTTTACGCCATTTGAGTATCCGGTATGCACAGCTGATGGAAGCGTTTTTGATGTTATGAATATAACCCCATATATTATAAAATATGGAAAGCATCCTGTCACTGGAACTCCGATGAAGCAGGACGATCTCATTCCACTAAATTTCCACAAGAATGCAGAAGGAGAATATCAATGTCCTGTGCTAAACAAAGTTTTCACTGAATTTACTCATATCGTGGCTGCCATCAAAGAATTAAACGTCAAGACAAAAAACTGGAAGGAGCTGCTCACTGATGAGCCATTCACAAAAGATGATCTTATAACAATCCAGAATCCTAATGCACTTGATAGCAAAGTTCTTCTGGATTTTGATCACTTAAAAAAAAATTTGAAAGTTGATGATGAAGAAGTGAAGAAAACGGCTTCAGATCCAACCTATAACATAAATGTTGCTGGGGACATCAAGCAAATGCTTCAGGAGCTTGGAACTGAGAGAGGAAGGGAAACCGCACTGCATGGCGGAGGTGGTAACAAGGCACAAAAGGAAAGGGCTGCTGCACTGGTTGCCATCTTAGCTGCAAGGTCACGTCTTAAAGAGGATTCAGGAATAAGTTCAAATGGAGAGGCTAAACCTTCTCAGGCATTTAGTATTGTAGATGCAGCATCTGCTTCAGTTCATGGAAGAAGTGCAGCTGCTGCTAAAGCTTCATCAAGTGATAAAACTGCTGCTAGGATAGCTATGCATATGTCTGGTGAGAGGGCACCAGTGAATGCAAAGCTTGTCAAAAGCCGTTTCACAACTGGTGCTGCTTCCAGATCCTTCACTTCAACATCTTTTGATCCAGTTACAAAGAATGAATTTGAATATGTAAAAGTTGAGAAGAATCCAAAGAAGAAGGGATACGTTCAGCTGCATACAACACATGGTGATTTGAATATTGAAGTACACTGTGACATAACACCCAGAACATGTGAGAATTTTATCACACTTTGTGAACATGGATATTATAACGGAGTGGCTTTCCACAGAAACATTAGGAATTTTATGATACAAGGTGGTGATCCTACAGGGACTGGGAGCGGAGGTGAATCAATATGGGGAAAACCTTTTAAAGATGAATTTAACTCCAAAATGGTTCACGCGGGGAGGGGTGTTGTTAGCATGGCAAAGAGTGGTCCGCACACCAATGGCTCCCAGTTTTTCATCCTATACAAATCTGCAAATCACTTGAACTACATACATACAGTTTTTGGTGTAGTCGTTGGTGGCTTGACTACAGTAGCAGCCATGGAAAAGGTTCCTGTTGATGACAATGACCGACCCCTGGAGGAAATTAAGATAACAAGTGTCACGATTTTTGTCAATCCTTACTCAGAACTAGATGAAGAAGAAAAGCAGGAGAATGAGAAAGAGACGACAGTTGAGGATGAAGATAATGATAAGACTGGTTTATGGTATAGCAATCCTGGAGCCGGAACTTCAGAATCTGGAGACATGGGCAGTGGAGGTGTTGGCAAATACCTAAAAGCTAGGAATGCTCAAGCTGCAGCAGCTACTGTTGACACCAGTGCAGCCATTGTAGGAAAGAAAAGAAAAGCCGTAATTGCTTCTGGTGGATTTAAAGATTTTTCTGCTTGGTGAGAATCCCAATATTTGTACCATATGTACAAACTGTTAAAAGAGGTTCCCGCTGTAGCAGGTACTTTTACATTAGGAAAAATAACAGATTAGTGGGAAATTTTGATAAGAAATGTAATGATTAGTTGTTTGCGAGGAAAAGACATTTTGCCCGAAGTGCGTTCACTGGAAATCATGTTCTGTAGCTATCTTGTCAGAGTTCATAATTTGCTTTCCTATATAATGGATG 1885 0.4074 MGKKQHSKDRMLSFTPFEYPVCTADGSVFDVMNITPYIIKYGKHPVTGTPMKQDDLIPLNFHKNAEGEYQCPVLNKVFTEFTHIVAAIKELNVKTKNWKELLTDEPFTKDDLITIQNPNALDSKVLLDFDHLKKNLKVDDEEVKKTASDPTYNINVAGDIKQMLQELGTERGRETALHGGGGNKAQKERAAALVAILAARSRLKEDSGISSNGEAKPSQAFSIVDAASASVHGRSAAAAKASSSDKTAARIAMHMSGERAPVNAKLVKSRFTTGAASRSFTSTSFDPVTKNEFEYVKVEKNPKKKGYVQLHTTHGDLNIEVHCDITPRTCENFITLCEHGYYNGVAFHRNIRNFMIQGGDPTGTGSGGESIWGKPFKDEFNSKMVHAGRGVVSMAKSGPHTNGSQFFILYKSANHLNYIHTVFGVVVGGLTTVAAMEKVPVDDNDRPLEEIKITSVTIFVNPYSELDEEEKQENEKETTVEDEDNDKTGLWYSNPGAGTSESGDMGSGGVGKYLKARNAQAAAATVDTSAAIVGKKRKAVIASGGFKDFSAW 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00383 552 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 64 IPR013083 -
Bach10g00383 552 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 301 472 IPR044666 -
Bach10g00383 552 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 288 472 - -
Bach10g00383 552 Coils Coil 466 486 - -
Bach10g00383 552 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 405 417 IPR002130 GO:0000413|GO:0003755
Bach10g00383 552 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 418 433 IPR002130 GO:0000413|GO:0003755
Bach10g00383 552 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 321 336 IPR002130 GO:0000413|GO:0003755
Bach10g00383 552 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 347 359 IPR002130 GO:0000413|GO:0003755
Bach10g00383 552 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 390 405 IPR002130 GO:0000413|GO:0003755
Bach10g00383 552 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 307 457 IPR002130 GO:0000413|GO:0003755
Bach10g00383 552 SUPERFAMILY Cyclophilin-like 307 474 IPR029000 -
Bach10g00383 552 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 342 359 IPR020892 GO:0003755|GO:0006457
Bach10g00383 552 CDD cyclophilin_RING 307 465 - -
Bach10g00383 552 Gene3D - 288 473 IPR029000 -
Bach10g00383 552 ProSiteProfiles U-box domain profile. 12 76 IPR003613 GO:0004842|GO:0016567
Bach10g00383 552 MobiDBLite consensus disorder prediction 465 506 - -
Bach10g00383 552 FunFam Peptidyl-prolyl cis-trans isomerase 2 11 64 - -
Bach10g00383 552 CDD RING-Ubox_PPIL2 12 78 IPR026951 -
Bach10g00383 552 SUPERFAMILY RING/U-box 12 72 - -
Bach10g00383 552 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 311 458 IPR002130 GO:0000413|GO:0003755
Bach10g00383 552 SMART Ubox_2 12 69 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00383 Bach-Chr10 2679322 2683764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00383 1 552 U-box Gene Family AT5G67530 66.389 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00383 K10598 - gmx:100819923 861.677