Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00347 ATGCGACTGCTCCTCTTGCTTTTCGTCCTTCTCCACTTCCATTACACCTTCTCTGCAACTACGCGCATGTCAGAGTACCGTGCGCTGCTCTCCCTCAAGATTGCTATTACCGACCACCCCCAATCTGCTCTTTCCACTTGGAACGCCTCTACCAGCCACTGCACCTGGACCGGCGTCACCTGCGATTCCCGCCGACACGTTACCGCTCTTGACCTGACCGGTCTCAGCCTCTCCGGTACACTTTCCAATGACATAGCCCACCTCCCACTCCTCTCTAACCTCTCCGTCGCCGATAATAAGTTCTCTGGACCCATCCCTCCTGAGATCTCCTCCATCACTGGCCTCCGATTCCTTAATCTTTCTAACAATATATTCAATGGCACTTTCCCTTCCGACCTCTCCCAGCTCAAGAATCTCCAGGTCCTCGACTTGTATAACAACAACATGACTGGTGACCTCCCACTCGCCGTCACCCAGATGCAGAATCTACGGCATTTGCATCTCGGAGGTAACTTTTTTTCAGGTAAGATCCCGCCGGAGTATGGACAATGGCAACATTTGGAATACTTGGCTGTTTCCGGTAACGAGCTGACCGGCACTATACCGCCGGAGATCGGGAACTTGACCAGCCTCCGAGAACTCTATATTGGATACTTCAACACTTATGAGAATGGTATTCCACCTGAGATTGGCAGTTTGTCCGAATTAGTGAGGCTTGACGCGGCCAACAGTGGATTGACCGGCGAGATACCACCGGAACTCGGGAAACTTCAAAATCTTGATACTCTATTTCTTCAAGTGAATGGGCTTTCAGGGTCTTTGACGCCTGAGCTGGGGAAGCTGAAGAGCCTGAAGTCCATGGATTTATCCAACAATATGCTTGCAGGTGAGATTCCGGAGGCCTTTGCTGAGCTCAAGAACCTGACCCTCTTGAACCTGTTCAGAAATAAGCTTCACGGAGCGATTCCCGAGTTCATTGGTGAGATGCCAGCCCTGGAGGTACTGCAGCTTTGGGAGAACAACTTCACTGGGAGTATTCCTCAGGGTTTGGGGAAGAATGGGAGGTTTGTGGTTGTTGATCTTTCTTCAAACAAATTGACTGGGACCCTGCCTCCTGATATGTGCTCTGGGAATCACCTTCAGACTTTGATAACTCTCGGTAATTTCTTATTTGGCCCTATTCCTGAATCCCTTGGGAGGTGCGGGTCGTTAACTCGGGTTCGTATGGGAGATAACTTTCTGAATGGGTCAATTCCGAAAGGCCTCTTTGGGCTTTCCAAACTTACTCAGGTGGAGCTGCAGAACAATCTTCTCTCAGGGCAGTTTCCAGAGGCCGGTTCGGTATCTGTTAACCTCGGTCAGGTTAGTCTATCTAACAACCAGCTTTCTGGGTCATTGCCGCCAACGATTGGTAACTTTTCCGGTATGCAGAAACTACTCCTTGATGGCAATAAGTTCTCAGGTCGAATCCCTCCTGAGATTGGGAGATTACAGCAACTTTCAAAGATAGATTTTAGCCACAATAAGTTTTCAGGCCCCATTGCGCCGGAAATTAGTCAATGCAAGCTATTGACGTTCGTTGATCTTAGTCGTAATGAGCTTACTGGTGACATTCCGAATAATATTACTGCTATGCGGATATTGAATTACTTGAATCTTTCGAGAAATCATCTAGTTGGTAGCATTCCAGCATCAATATCAAGTATGCAGAGCTTAACTTCTGTTGATTTTTCTTATAACAATCTCTCTGGTTTGGTTCCTGGCACTGGCCAATTCAGCTACTTCAACTACACCTCTTTTCTGGGCAACCCTGACCTCTGTGGCCCGTATTTGGGTCCTTGTAAGGATGGGGTTGGCAATGCCCACCAATCCCATGCTAAAGGTCCACTCTCTGCTTCTCTGAAGCTCCTGCTGGTTATTGGATTGCTTCTATGTTCGATTGCATTTGCAGTCGCAGCAATAATTAAAGCACGATCATTGAAGAAGGCCAGTGAATCCCGTGCATGGAAATTGACTGCATTCCAACGCTTAGACTTCACTGTTGATGATGTTTTGGATTGCTTGAAGGAGGACAACATCATAGGGAAAGGAGGTGCAGATTCTGGAGCATCTGAATGCATGTCTGCTATTGCCGGTTCATATGGATACATAGCTCCAGAGTATGCCTATACACTAAAAGTCGACGAGAAAAGTGACGTGTACAGCTTTGGCGTGGTTCTTTTAGAGCTTATTACAGGCCGGAAACCAGTTGGTGAATTTGGTGATGGTGTGGACATTGTGCAATGGGTGAGGAAAATGACGGACTCAAAGAAGGAAGGAGTACTAAAAGTTCTTGATCCTAGACTTCCCTCAGTTCCCCTCCATGAAGTGATGCATGTCTTTTATGTAGCCATGCTTTGTGTTGAAGAACAGGCTGTAGAGCGTCCAACTATGCGTGAAGTTGTTCAAATTCTAACCGAGTTTCCAAAGCCACCTGGTTCCAAACAGGGGGACAAAACCGTGACGGTGTCCTCCTTGTCACCAGCAAACGCTTCAGAGTCTTCAGAGTCTCCGACGGCAGCGTCCAAAGAAGCTAAAGACAATCAACATCCTTCTCAATCACCACCACCTGATCTACTTAGCATTTGA 2628 0.476 MRLLLLLFVLLHFHYTFSATTRMSEYRALLSLKIAITDHPQSALSTWNASTSHCTWTGVTCDSRRHVTALDLTGLSLSGTLSNDIAHLPLLSNLSVADNKFSGPIPPEISSITGLRFLNLSNNIFNGTFPSDLSQLKNLQVLDLYNNNMTGDLPLAVTQMQNLRHLHLGGNFFSGKIPPEYGQWQHLEYLAVSGNELTGTIPPEIGNLTSLRELYIGYFNTYENGIPPEIGSLSELVRLDAANSGLTGEIPPELGKLQNLDTLFLQVNGLSGSLTPELGKLKSLKSMDLSNNMLAGEIPEAFAELKNLTLLNLFRNKLHGAIPEFIGEMPALEVLQLWENNFTGSIPQGLGKNGRFVVVDLSSNKLTGTLPPDMCSGNHLQTLITLGNFLFGPIPESLGRCGSLTRVRMGDNFLNGSIPKGLFGLSKLTQVELQNNLLSGQFPEAGSVSVNLGQVSLSNNQLSGSLPPTIGNFSGMQKLLLDGNKFSGRIPPEIGRLQQLSKIDFSHNKFSGPIAPEISQCKLLTFVDLSRNELTGDIPNNITAMRILNYLNLSRNHLVGSIPASISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGPCKDGVGNAHQSHAKGPLSASLKLLLVIGLLLCSIAFAVAAIIKARSLKKASESRAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGADSGASECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSKKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTEFPKPPGSKQGDKTVTVSSLSPANASESSESPTAASKEAKDNQHPSQSPPPDLLSI 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00347 875 Gene3D Ribonuclease Inhibitor 343 618 IPR032675 -
Bach10g00347 875 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Bach10g00347 875 Gene3D Transferase(Phosphotransferase) domain 1 681 837 - -
Bach10g00347 875 SUPERFAMILY RNI-like 70 391 - -
Bach10g00347 875 SMART LRR_typ_2 329 353 IPR003591 -
Bach10g00347 875 SMART LRR_typ_2 136 160 IPR003591 -
Bach10g00347 875 SMART LRR_typ_2 497 521 IPR003591 -
Bach10g00347 875 SMART LRR_typ_2 281 304 IPR003591 -
Bach10g00347 875 SMART LRR_typ_2 569 592 IPR003591 -
Bach10g00347 875 SUPERFAMILY L domain-like 354 614 - -
Bach10g00347 875 Gene3D Ribonuclease Inhibitor 222 342 IPR032675 -
Bach10g00347 875 Pfam Leucine rich repeat 259 318 IPR001611 GO:0005515
Bach10g00347 875 Gene3D Ribonuclease Inhibitor 22 221 IPR032675 -
Bach10g00347 875 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 162 813 - -
Bach10g00347 875 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 82 325 - -
Bach10g00347 875 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 333 618 - -
Bach10g00347 875 MobiDBLite consensus disorder prediction 830 875 - -
Bach10g00347 875 Pfam Leucine Rich repeats (2 copies) 137 177 IPR025875 -
Bach10g00347 875 SUPERFAMILY Protein kinase-like (PK-like) 705 825 IPR011009 -
Bach10g00347 875 ProSiteProfiles Protein kinase domain profile. 494 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach10g00347 875 Pfam Protein tyrosine and serine/threonine kinase 714 818 IPR001245 GO:0004672|GO:0006468
Bach10g00347 875 MobiDBLite consensus disorder prediction 821 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00347 Bach-Chr10 2426736 2430246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00347 700 875 Receptor kinase-like Gene Family AT5G65700 73.864 4.46e-71 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach10g00347 PK_Tyr_Ser-Thr 2.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00347 - - qsa:O6P43_033961 1170.22