Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00342 ATGGCTGCAGAGATTGGCCTTCTCTCCATGACCCAGACCCAAAAATTGTCACAATCCCAACAACATCAAAATCAAAATAAACCTCAGCCAAACCCTAACTCTACTTCCACCGCATCGTGGATGTGGAACCCTAGGGAAAACCAGGATGATGACGACTCTTGGGAGGTCAGAGCTTTTGCAAGGCACCAGAAACATGGGTACACTTGGCCTCCCAGGTCATACACCTGCACCTTCTGCAGAAGGGAATTCCGTTCAGCCCAAGCTCTAGGCGGCCACATGAACGTGCACCGCCGTGACCGGGCCCGGCTCCACCACCAAGCGCAACCTTGTTCAGTCAACATCAACCTCAACTCATCTCTTACATCCTCATTCATAATCCCAGCTCAAGAGCTTGTTGCAAATGGTGGATTGTGCCTTCTCTACCATTTACCAAGCCCTAATTGTAGCTTCACTACTACTCCCAGAAGTCTAAATGCATGTGCTAAATCACCATCCACACTCCTTTCCATTTCACCTCGCCCACCTAACAACCTGCAGATGCTAACTTGCTCTTCTTCCCTTGATTTCCGGTGGCAATGTCAGGTGGGATCGATTCCTCTTACTGCAATTCTAGCAAAGTCGAACAACACACAAGCTCCTCTAGCGACAATAATGGCTACGAAGAGCTTGATCTAG 675 0.4904 MAAEIGLLSMTQTQKLSQSQQHQNQNKPQPNPNSTSTASWMWNPRENQDDDDSWEVRAFARHQKHGYTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHHQAQPCSVNINLNSSLTSSFIIPAQELVANGGLCLLYHLPSPNCSFTTTPRSLNACAKSPSTLLSISPRPPNNLQMLTCSSSLDFRWQCQVGSIPLTAILAKSNNTQAPLATIMATKSLI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00342 224 MobiDBLite consensus disorder prediction 1 52 - -
Bach10g00342 224 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
Bach10g00342 224 MobiDBLite consensus disorder prediction 7 44 - -
Bach10g00342 224 SUPERFAMILY beta-beta-alpha zinc fingers 71 101 IPR036236 -
Bach10g00342 224 PANTHER OS07G0101800 PROTEIN 48 192 - -
Bach10g00342 224 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Bach10g00342 224 Pfam C2H2-type zinc finger 74 98 - -
Bach10g00342 224 Gene3D Classic Zinc Finger 57 122 - -
Bach10g00342 224 SMART c2h2final6 74 96 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00342 Bach-Chr10 2386766 2387440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00342 38 165 C2H2 Transcription Factor Family AT4G17810 46.939 7.85e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach10g00342 zf-C2H2_6 4.6e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00342 - - jre:108984087 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00389 4 2588255 2588971 Bach10g00342 10 2386766 2387440 BWGD
Bach10g00342 10 2386766 2387440 Bach10g00342 10 2386766 2387440 ECH