Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00340 ATGGATTCTCGTGAACCCCCTCAGCAACCGCCACCGCTACAACAGCAACCACAGCCGCAGTCACAACCACAGCCCCCATCAGTGGCACCAAACATGATTATAGGACACGCTTCGTACGCCTCCACCGTGCCCAACCCCAATAGTTCTCCTATGATCAGCCCCAATTCCACAGCCACGATGATGGCTCCTGCCACCGCTCGATTCCCATTCAATCCAGGAGTTCCTCAACTCCCTGCTCAAACAAAGCCTCCGGAACTTCTGAACTCCACCAATCCTTACGATGGGTCTTCTTCTGCTTTGAGGTCATGTGGGTTTAGCATTGATTCTGCGAAGAAGAAGAGAGGCCGGCCGAGAAAATATTCGCCGGATGGTAACATTGCTTTGGGTTTGGCTCCCACGCCTGTGTCTTCTTCTGCCGTTCAGGGCGATTCCAGTGGCACGCCGTCTACGGAACCTCCGGCAAAGAAAAATAGGGGAAGGCCGCCGGGCTCTGGAAAGAAGCAGTTGGATGCCCTTGGAGCTGGCGGTGTTGGGTTTACTCCACATGTAATCATGGTGAATGCTGGTGAGGACATTGCATCAAAGATTTTTGCCTTTTCTCAACAAGGACCACGGACAGTTTGTATTCTTTCTGCCAATGGTGCTATCTGCAATGTCACCCTTCGTCAGCCAGCAATGTCTGGTGGTACTGTGACATATGAGGGCCGATTTGAGATTATATCTCTGTCAGGTTCTTTCCTGTTTTCTGAAAATAATGGCGGTCGTGGCAGAATAGGTGGTTTGAGCGTGTCTCTTGCAGGGTCTGATGGACGAGTTTTGGGTGGTGGAGTTGCTGGAATGCTAACTGCAGCATCACCTGTGCAGGTCATTGTGGGTAGCTTTACAACGGATGGGAAAAAGTCGAGCGCAAATGTCGTGAAATCTGGCCCTTCGTCGGCACCGTCATCCCAAATATTAAATTTTGGTGCACCTATGACTCCAACTAGTCCTACCTCCCAAGGGCCTTCAACCGAGTCGTCTGGTGACAATGGTGATAGTCCTTTCAATAGAGGCCCTGGACTCTACACTAATGCTGCTAGTCAGCCCATTCACAATATGCCAATGTACCATCATCAACTATGGGCCGGCCAAACACCGCAGTGA 1143 0.5109 MDSREPPQQPPPLQQQPQPQSQPQPPSVAPNMIIGHASYASTVPNPNSSPMISPNSTATMMAPATARFPFNPGVPQLPAQTKPPELLNSTNPYDGSSSALRSCGFSIDSAKKKRGRPRKYSPDGNIALGLAPTPVSSSAVQGDSSGTPSTEPPAKKNRGRPPGSGKKQLDALGAGGVGFTPHVIMVNAGEDIASKIFAFSQQGPRTVCILSANGAICNVTLRQPAMSGGTVTYEGRFEIISLSGSFLFSENNGGRGRIGGLSVSLAGSDGRVLGGGVAGMLTAASPVQVIVGSFTTDGKKSSANVVKSGPSSAPSSQILNFGAPMTPTSPTSQGPSTESSGDNGDSPFNRGPGLYTNAASQPIHNMPMYHHQLWAGQTPQ 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00340 380 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 30 352 IPR039605 GO:0003680
Bach10g00340 380 MobiDBLite consensus disorder prediction 38 62 - -
Bach10g00340 380 SUPERFAMILY AF0104/ALDC/Ptd012-like 179 296 - -
Bach10g00340 380 MobiDBLite consensus disorder prediction 82 104 - -
Bach10g00340 380 MobiDBLite consensus disorder prediction 298 360 - -
Bach10g00340 380 MobiDBLite consensus disorder prediction 1 172 - -
Bach10g00340 380 MobiDBLite consensus disorder prediction 1 26 - -
Bach10g00340 380 Gene3D - 181 306 - -
Bach10g00340 380 Pfam Plants and Prokaryotes Conserved (PCC) domain 181 295 IPR005175 -
Bach10g00340 380 SMART AT_hook_2 111 123 IPR017956 GO:0003677
Bach10g00340 380 SMART AT_hook_2 155 167 IPR017956 GO:0003677
Bach10g00340 380 CDD DUF296 180 294 IPR005175 -
Bach10g00340 380 ProSiteProfiles PPC domain profile profile. 175 316 IPR005175 -
Bach10g00340 380 MobiDBLite consensus disorder prediction 131 152 - -
Bach10g00340 380 MobiDBLite consensus disorder prediction 298 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00340 Bach-Chr10 2357774 2361283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00340 93 380 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 51.940 2.74e-84 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00340 - - qsa:O6P43_033975 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00387 4 2558017 2562468 Bach10g00340 10 2357774 2361283 BWGD