Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00337 ATGCCAGTTCCACTTGCTCCATACCCAACACCACCGGCTCCATATACTCCTCCAGCAAATGGTGCTCAGAGTCAGCTAGTCTGTTCGGGATGTAGAAACCTGCTGCTTTATCCCGTTGGAGCCACCTCTGTCTGCTGCGCTGTTTGCAATGCAGTCACAGCTGTGCCTCCTCCTGGCACAGAAATGGCCCAGTTGATTTGCGGAGGATGCCACACGTTACTCATGTACATTCGCGGAGCAACAAGTGTGCAATGCTCTTGTTGTCACACTGTCAATCTAGCTCTAGAAGCAAATCAAGTGGCACATGTCAACTGTGGGAACTGTAGGATGCTATTGATGTACCAGTATGGAGCAAGATCCGTGAAATGTGCAGTTTGCAATTTTGTGACATCAGTTGGGGCCTCAACAAGCACTACTGAGCAGAAATTTAGCAGCTAA 438 0.4909 MPVPLAPYPTPPAPYTPPANGAQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLICGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASTSTTEQKFSS 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00337 145 Pfam LSD1 zinc finger 105 129 IPR005735 -
Bach10g00337 145 Pfam LSD1 zinc finger 67 91 IPR005735 -
Bach10g00337 145 Pfam LSD1 zinc finger 28 52 IPR005735 -
Bach10g00337 145 NCBIfam zinc finger domain, LSD1 subclass 64 93 IPR005735 -
Bach10g00337 145 NCBIfam zinc finger domain, LSD1 subclass 102 132 IPR005735 -
Bach10g00337 145 NCBIfam zinc finger domain, LSD1 subclass 25 55 IPR005735 -
Bach10g00337 145 PANTHER PROTEIN LSD1 16 55 IPR040319 -
Bach10g00337 145 SUPERFAMILY Multiheme cytochromes 28 126 IPR036280 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00337 Bach-Chr10 2342027 2343416 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Bach10g00337 zf-LSD1 8.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00337 - - qsu:112000975 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00383 4 2538128 2539420 Bach10g00337 10 2342027 2343416 BWGD