Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00332 ATGGCGGGGGCATCACTGCCGCCAGGTTTTCGTTTCCACCCAACTGATGAAGAATTGGTGGGATATTACCTGAAGAGAAAAGTGGAGGGTCTCCAAATTGAGCTTGAAATTATACCCGTAATTGATTTGTACAAGTTCGATCCGTGGGAGTTGCCGGAGAAATCATTTCTACCAAGTCGAGATTTTGAATGGTTTTTCTTCTGTCCACGGGATCGCAAGTACCCAAATGGCTCACGAACAAATAGAGCTACCAAAGCTGGCTACTGGAAAGCCACCGGAAAAGACAGGAAGGTCGTCTGTCAAACCACCCCTTTAACGGAGACAGCCACGGGGTACCGGAAAACATTGGTTTTCTACCGTGGCCGAGCCCCTTTAGGGGATCGAACAGACTGGGTCATGCATGAGTATCGCCTTTGTGATGATCTTGGTCAAGGACCACCGAGTTTTCTGGGTGGTTTTGCTCTCTGCCGAGTTGTTAAAAAGAATGAGAAGGCAAACGATTCTCAGGGAGAGCACAAGGGTAAAAGGGCTGGAACCAGTTCCACCAATGGGGATCACACTTCAATGAAAGTCTCCAACGAGCCCTTGAGCATTTCTGGTGATGTTTCTTCTCAAGCAAGTCACATGAACCTTGAGAATCGTTATTCAAGCCCAATAACTTCTCCATACAATGTGGCTCCAGTGCCAGAGTTTGAGACCAATCCTGCAAACATCTGGGTCTCCCCTGATTTTATTCTTGATTCTTCGAAGGACTTCCCTCAAGTACAAGAGTCTGAGTACTTTCCACAGTGTGGCTTTTCAAGCTCCATAACACCATGGCAGTCATTCGAACACACAGAAATTTCACCCAGTTCATCTTACTCAAATTTTAACGGGGAAATGGAATTAGGTGATGATCTCAATCGAATTGGTTGCATGTCACCTTACTCAGGACAAGGAAACTTCATGGACTTCTATGGAAATGAGGATGTGTCTTACGAAGGTTATGATCAAATCAATTCAATCGGATATCCAAGAGCTTTCTGA 1026 0.4552 MAGASLPPGFRFHPTDEELVGYYLKRKVEGLQIELEIIPVIDLYKFDPWELPEKSFLPSRDFEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQTTPLTETATGYRKTLVFYRGRAPLGDRTDWVMHEYRLCDDLGQGPPSFLGGFALCRVVKKNEKANDSQGEHKGKRAGTSSTNGDHTSMKVSNEPLSISGDVSSQASHMNLENRYSSPITSPYNVAPVPEFETNPANIWVSPDFILDSSKDFPQVQESEYFPQCGFSSSITPWQSFEHTEISPSSSYSNFNGEMELGDDLNRIGCMSPYSGQGNFMDFYGNEDVSYEGYDQINSIGYPRAF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00332 341 Pfam No apical meristem (NAM) protein 7 138 IPR003441 GO:0003677|GO:0006355
Bach10g00332 341 FunFam Nac domain-containing protein 86 15 164 - -
Bach10g00332 341 Gene3D NAC domain 15 167 IPR036093 GO:0003677|GO:0006355
Bach10g00332 341 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 207 - -
Bach10g00332 341 MobiDBLite consensus disorder prediction 164 190 - -
Bach10g00332 341 ProSiteProfiles NAC domain profile. 6 161 IPR003441 GO:0003677|GO:0006355
Bach10g00332 341 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
Bach10g00332 341 MobiDBLite consensus disorder prediction 175 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00332 Bach-Chr10 2321827 2323396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00332 1 295 NAC Transcription Factor Family AT4G17980 53.177 3.17e-103 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach10g00332 NAM 1.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00332 - - gmx:100792714 540.036