Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00299 ATGCCCGTAGCATCGAGAACTCGGTTTAGAGCGAAGAATGATGAAATGGGGGCTAAGAAACAGAGCAGGAAGAAAGACCGTGATTTGGAGGTTAAGAAACAGAGCAATAAGGAAAACGCGGTTGGTCCGGTTAGTGACATGCAACCCAACTCAGTGTTTGCCCGGGGAAAACCACTTAGGGCTAATCTTGTGAAAGAAGAGCATAATATGGCGCGCGAGGATGAAAACGTGAAACTTCTTATTGTGGGTGACAGTGATGATGACGATTTGTATATTGTAGAGCCTCAGGAGACAAGTCCTCAATATGAGGACGTTATTGATCTTTGTTCGTCATCTGAAGTCGACAACGATAATTTAGACAAGGATGATCCTGAGACAAGCGAGGTTTCTGCTGCCGTTGATGATGAGGATGTGGCATTCCCTGACCATGGGAACAATGAAGAAGAAATTCTTGAACATCCCAGTAGCCCCGAGGAGATAATTTCTGAGGACGTATGGGGAGAAGACGTAGAATTTGTTGGAGAAAGTGAGGTCAAGAAGACAAGGCACAAGACAAAGACTATTGAGCCTGGACTGAAGAGGATAAAAGCATATGGCCTCGACATATTGATTCAAGAACGCTATTCCAGGGAGGATGCTACAGCTTCCGTATATACGGGTAAATCTGTTGCACAACGAACACGTTCCCATTCAAAACGTAAGACCAAAAAAGTAAAGTTGGGAACTTTAAGTCAACCCATATGTGTCGACCTGGAGGAGGAGGAAGAGGCAGAGTTTGATTCTGATTATGGTGATTTGGAGGATGCACCAAATTACATTGTTAGGAAAAGGAAGAGGGCTACTTATAGTAAAGCCCTCTTTTTTGATGAGGAGGATGAGGAAGAGCCTGACTCTGACTCTGAGCACCGTGATTTGAACGAGGAAAGAAATCGCGTCCTTCTGGAAAAGAATTCTACTAGGAGCAAATCGGCCTCTAATGATTGTATTGATGATGATAATCACAAGAAGTTCTGTAATGGAGTTAGTGGTGGGTCTGTTGAAGCAAAATCCAGCAGTGACGAAATGGATGGCATTCCAAGTTCGCAGAATGTAGGCAAGAGAGGGAAGCTGAGGAAGTCCTCTATTGAAAAACACATACCTTCTCGGAAAGATTATGATGTAATCAAGATTCTTCAGGATTCCATCTGTAGTAAAGGAGAAGTGCCTTTGGAGAATGTAGTTTCATCAACAAATCATGAAACTGATCCAGCAGATATTGCTTTACCGTTGAAGTTTCATTTTGGAACAGAGGAGACACCACCTGAGAAATCAGAAGAGGAGAAAGAATTAGAGCGACTCTGGGCTGAATATGATCGAGTGGTAAATATGATAGTGCAAAATTCTGGTCCTGTTGCTGCTGAGGTTGAAAATGATATGGATGCTGTAAAAACAGCTACTCTTTGCCAGCAGGGGAAGCATAGGCTTATTATTGATGATGAAATTGGACTTAGATGTGCAGTTTGCGGTCATGTAGAGACGGAGATTAAGCACATGTTACCTCCTTTTAGTAGATATCCCTTTGGAAAGTCTGGCAGGAGAGACTCTTTTGTGGAGCACGTGGACCACACTGTGTTTAATGATCTCGGGCATCAATCCACTGGTTGGGATAACTTGTCTGGCCATCACAATTGCAGTGGAACAGTTTGGGATATAATTCCTGAAGTAAAGGATAGAATGTATCCGCACCAGTGTGAGGCTTTTGAATTTCTTTGGAAGAAGATAGCTGGTGAGATTGTTCTTGACAAGTTGAAACAGCAAGCAGATTTTTCTCATGGGAGTGGGTGCATTATATCACATGCTCCTGGCACTGGGAAAACCTTTCTTACTATTGCATTTATCTGGTCCTTCATGGAACTATATCCCAATTGCAGACCAATCATCATTGCTCCTAAGAGCATGCTTCTAACATGGGAAGAGGAATTTAGGAAGTGGAAAGAAGAATTTAGCAAGTGGAAATTTGATATTCCCTTTCACAATTTGAACAATGATGAGTACTCTCTCAGGGAGAATGAGGTAGCTATGAGCCTTCTGAGGAAATCTGGATTGAATAATATTACTAACAAGGAAACTGTCCGTTTGGTGAAGTTGTTTTCCTGGAAAAAGGAGAGAAGTATCTTGGGAATCGGTTACAGTTTGTTCAAGACACTTGCTGGAAGAAACAAGGATTTAAGGGAAGCCCTTCTAGAGCTTCCTGGTTTATTAGTTCTTGATGAGGGGCACACCCCGCGCAATGATAGGTCTCTTATATGGAAAGCTGTGTCTGAAATCCAGACAAGAAAACGCATCATCCTCTCCGGAACTCCCTTTCAGAATAACTTTGATGAGCTATACAACACACTCTGCTTGGCTAGTCCAATATTTGGAGGAGGCAAAAAAAATGAAACCAAGGGGAAGTGGGCATATCTGATCAATGCAATTGGCAAAGCTAGTGATAGAAATGGAGAAAAAGGTAAGTTATTGAGTGAAGTCAAAGGAATGATTCGTCCATTTGTGCATGTATACAAGGGTACTATCCTGCAGGATACTCTTCCTGGGTTGAGGGAATTGGTCATTGTATTAAAGCCAACCATGTTGCAGAAGAAACTCTTTGAGGATATTCAGGAACTCGAGAATAAATTCAAGTATGATCATTTAGAGTCTTTAATTGCTGTTCATCCTTCGCTCTATCCATCTGTAGAGGGGGACAAGGTAGAAAGATGTAGAATAAAAACTGAGGATGGAATCAAGACAAGATTTTTAATGGAACTCATCAGGCTTAGTGCACTTATGGATGAAAAAGTCTTGGTATTTAGTCAGTACTTAGATCCCTTGATCTTTCTGACAGATCAGCTTACATCTCGTTTTAATTGGGGGAAAGGAAGAGAGGTATTAGTAATTCACGGAAAAGATGATGTGAAGCAACGTCAAGCATCAATAAGCACTTTTAATGATCCTGCTGGCAAAGCAAAGGTATTGCTAGCATCAAAGAAGGCATGTTTTGAAGGGATTAATTTGGTTGGTGCTTCCAGAGTTGTTCTGCTTGATGTTGAATGGAATCCTGCAGTAGAACGGCAAGCTGTAAGCCGTGCATATCGTGTAGGGCAGAAGAAAATGGTCTACACTTACCGTCTTATATCAGCAGGCACAAGGGAGGAAGATAAATGTAGTCGTCAAGCTGAGAAGGATCACTTGTCTGAATTCATGTTCTTTAATTCTAATGGGGCTGGCTGTGAGAAGAATACCACGCCAGCATATTTTGAAGATGAGATTCTGAAACAGATGCTTCATCATGAAAATTGTAGACTTATGTTTGATAGGATAGCTACTATAGGGATAGCTACTAATAAAATATCACTTTTTGGAGATGATTGTTTCTGTTTTCTGGACAAGTGA 3411 0.4154 MPVASRTRFRAKNDEMGAKKQSRKKDRDLEVKKQSNKENAVGPVSDMQPNSVFARGKPLRANLVKEEHNMAREDENVKLLIVGDSDDDDLYIVEPQETSPQYEDVIDLCSSSEVDNDNLDKDDPETSEVSAAVDDEDVAFPDHGNNEEEILEHPSSPEEIISEDVWGEDVEFVGESEVKKTRHKTKTIEPGLKRIKAYGLDILIQERYSREDATASVYTGKSVAQRTRSHSKRKTKKVKLGTLSQPICVDLEEEEEAEFDSDYGDLEDAPNYIVRKRKRATYSKALFFDEEDEEEPDSDSEHRDLNEERNRVLLEKNSTRSKSASNDCIDDDNHKKFCNGVSGGSVEAKSSSDEMDGIPSSQNVGKRGKLRKSSIEKHIPSRKDYDVIKILQDSICSKGEVPLENVVSSTNHETDPADIALPLKFHFGTEETPPEKSEEEKELERLWAEYDRVVNMIVQNSGPVAAEVENDMDAVKTATLCQQGKHRLIIDDEIGLRCAVCGHVETEIKHMLPPFSRYPFGKSGRRDSFVEHVDHTVFNDLGHQSTGWDNLSGHHNCSGTVWDIIPEVKDRMYPHQCEAFEFLWKKIAGEIVLDKLKQQADFSHGSGCIISHAPGTGKTFLTIAFIWSFMELYPNCRPIIIAPKSMLLTWEEEFRKWKEEFSKWKFDIPFHNLNNDEYSLRENEVAMSLLRKSGLNNITNKETVRLVKLFSWKKERSILGIGYSLFKTLAGRNKDLREALLELPGLLVLDEGHTPRNDRSLIWKAVSEIQTRKRIILSGTPFQNNFDELYNTLCLASPIFGGGKKNETKGKWAYLINAIGKASDRNGEKGKLLSEVKGMIRPFVHVYKGTILQDTLPGLRELVIVLKPTMLQKKLFEDIQELENKFKYDHLESLIAVHPSLYPSVEGDKVERCRIKTEDGIKTRFLMELIRLSALMDEKVLVFSQYLDPLIFLTDQLTSRFNWGKGREVLVIHGKDDVKQRQASISTFNDPAGKAKVLLASKKACFEGINLVGASRVVLLDVEWNPAVERQAVSRAYRVGQKKMVYTYRLISAGTREEDKCSRQAEKDHLSEFMFFNSNGAGCEKNTTPAYFEDEILKQMLHHENCRLMFDRIATIGIATNKISLFGDDCFCFLDK 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00299 1136 MobiDBLite consensus disorder prediction 1 52 - -
Bach10g00299 1136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 745 1074 IPR027417 -
Bach10g00299 1136 Gene3D - 857 1117 IPR027417 -
Bach10g00299 1136 Gene3D - 551 841 IPR038718 -
Bach10g00299 1136 SMART helicmild6 951 1040 IPR001650 -
Bach10g00299 1136 SMART ultradead3 568 807 IPR014001 -
Bach10g00299 1136 MobiDBLite consensus disorder prediction 290 329 - -
Bach10g00299 1136 Pfam SNF2-related domain 600 882 IPR000330 GO:0005524|GO:0140658
Bach10g00299 1136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 563 795 IPR027417 -
Bach10g00299 1136 CDD SF2_C_SNF 922 1051 - -
Bach10g00299 1136 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 41 1113 IPR044567 GO:0080188
Bach10g00299 1136 MobiDBLite consensus disorder prediction 8 35 - -
Bach10g00299 1136 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 928 1096 IPR001650 -
Bach10g00299 1136 Pfam Helicase conserved C-terminal domain 926 1040 IPR001650 -
Bach10g00299 1136 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 599 799 IPR014001 -
Bach10g00299 1136 MobiDBLite consensus disorder prediction 302 316 - -
Bach10g00299 1136 MobiDBLite consensus disorder prediction 344 374 - -
Bach10g00299 1136 MobiDBLite consensus disorder prediction 344 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00299 Bach-Chr10 2068079 2071888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00299 937 1075 RAD5 or RAD16-like Gene Family AT5G05130 40.000 1.27e-17 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach10g00299 SNF2_N 1e-20 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00299 K10875 - jre:109003751 734.176