Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00287 ATGGAACTTCATTCTAAAGACATACTTGGCCTTGTTTGCATGATTCTACTCTTGCCTGCACTATGCACCTCTCAGGACGATTTTACTAGTTCCAGAGCAACCTATTATGGTAGCCCAGATTGCTATGGGACTCCAAGCGGAGCTTGTGGCTTCGGCGAACATGGAAGGACAGTCAACGATGGAAATGTCGCAGGCGTGTCCAGGCTATGGATGAATGGATCTGGTTGTGGTGCATGCTATCGGGTTAGGTGCAAAATCCCACAATACTGCGATGACGACGGAGCAAACGTAGTGGTGACGGATTATGGTGAGGGAGACAGAACAGACTTCATCCTGAGCCCACGCTCCTACTCAAGATTGGGACGCAACTCTGATGCTTCTGCAGAGCTCTTCAAATACGGCGTCGTTGATGTAGAATTCAAAAGGGTCCCTTGTAGATACGCTTGCAACATCCTCGTCAAGGTCCATGACAACAGCAGAAACCCTCACTACTTAGCCATCGTGGCTCTCTATGTCGGTGGAAAAAACGACATCACTGCTGTTCAGTTTTGGCAGGAGGACTGCAGAGAATGGAGGCCTATGCGCCGAGCGTTTGGAGCTGTATTCGACGTTGCAAACCCACCCAGTGATCAAATTAACTTGAGGTTCCAAGTGAATGGAAGGGCAGAATGGGTGCTGCTCAAAAGGCCTATCCCCGGTGATTGGGAAGCCGGAGCTGCTTATGAAACGGACATGCAGTTTTATTAA 747 0.4926 MELHSKDILGLVCMILLLPALCTSQDDFTSSRATYYGSPDCYGTPSGACGFGEHGRTVNDGNVAGVSRLWMNGSGCGACYRVRCKIPQYCDDDGANVVVTDYGEGDRTDFILSPRSYSRLGRNSDASAELFKYGVVDVEFKRVPCRYACNILVKVHDNSRNPHYLAIVALYVGGKNDITAVQFWQEDCREWRPMRRAFGAVFDVANPPSDQINLRFQVNGRAEWVLLKRPIPGDWEAGAAYETDMQFY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00287 248 CDD DPBB_EXLB_N 29 145 - -
Bach10g00287 248 Pfam Lytic transglycolase 63 139 IPR009009 -
Bach10g00287 248 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Bach10g00287 248 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Bach10g00287 248 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Bach10g00287 248 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Bach10g00287 248 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Bach10g00287 248 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576
Bach10g00287 248 Pfam Expansin C-terminal domain 153 231 IPR007117 -
Bach10g00287 248 PANTHER EXPANSIN-B3 18 247 - -
Bach10g00287 248 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 243 IPR007117 -
Bach10g00287 248 SUPERFAMILY Barwin-like endoglucanases 13 148 IPR036908 -
Bach10g00287 248 Gene3D - 148 248 IPR036749 -
Bach10g00287 248 Gene3D - 19 146 IPR036908 -
Bach10g00287 248 SUPERFAMILY PHL pollen allergen 150 242 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00287 Bach-Chr10 2017414 2018605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00287 4 245 Expansin Gene Family AT4G17030 58.300 3.05e-100 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00287 - - ccaj:109800044 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00325 4 2099308 2101198 Bach10g00287 10 2017414 2018605 BWGD