Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00272 ATGGCGAACCCAATTGAAGTTTCAGCCCTTAAACAAATAAAATTGCATCTTCTTGGCGAATTATCTCCAGTCGGGGCCTTCTCCAATGCCCTTTGCAGCTCAGCCACCGAAAAGCTATGGTTTGACGAAGCAAACCCAGCAGATTCAACTTCTCAATTTGATTCTCTCTGTTCCCAATCTTCGAGCTGCGACTCTTCCACCATCGTGTCTGATTGCTTCGCTGAAATCTTCGACTTCCCAATGAATTCCATGCCTTCCACAGAAAATCAGGTTAATCTGTTTGAATTCGAGTCAAAACCCCAAGTGATTGACCTCTCAACACCAAAAGTGGAGACAGAGATTTCACAGTTGGACGACAATTTCTCCAAATTCAAATCAAATTCGCAGTCCAATAGTGGTATCTTCGAGTTCCAACCAAGGCCTCAAACCATAGAGAAGAAATCTCTATCGAATCGGAAACCATCGTTGCAAATCTCGCTTCCAAAGAAAACCGAGTGGATCCAATTTGGAAACCCAGACCAGCAACAGGAGTTCCCAGAAATGTTCGAGCAGAATAACTCAAACCATGTAGAAAAGAAGCACTACAGAGGGGTCCGACGGAGACCATGGGGCAAGTTCGCTTCCGAGATCCGCCACCCGAATAAACGGGGATCCAGAATTTGGCTAGGAACTTTTGACACAGCTATCGAAGCCGCCAAGGCCTACGACAGAGCTGCGTTTAAACTCCGTGGCTCCAAAGCCATCCTCAACTTCCCTCTTGAAGCCGGAAAATCCATTCCCGTCACCGGCACTGACGATAGAAAACGCCGCCGTGAAGATGACGAAATAGAGGCTCAAGTGGAAGTAAATGCAGCGGTGAAGAAGGAGAAAACGGAAGAATCCGACATCAGTCGTATAAAGGACACTCCGTTAACACCGTCTATTTGGACATCGCTCTGGGACAGCGATGCCAAGGGAATTTTTAACATCACACCGTTATCTCCTATCCCTCTTATGGTTGTATGA 1005 0.4657 MANPIEVSALKQIKLHLLGELSPVGAFSNALCSSATEKLWFDEANPADSTSQFDSLCSQSSSCDSSTIVSDCFAEIFDFPMNSMPSTENQVNLFEFESKPQVIDLSTPKVETEISQLDDNFSKFKSNSQSNSGIFEFQPRPQTIEKKSLSNRKPSLQISLPKKTEWIQFGNPDQQQEFPEMFEQNNSNHVEKKHYRGVRRRPWGKFASEIRHPNKRGSRIWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEAGKSIPVTGTDDRKRRREDDEIEAQVEVNAAVKKEKTEESDISRIKDTPLTPSIWTSLWDSDAKGIFNITPLSPIPLMVV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00272 334 FunFam Ethylene-responsive transcription factor 2 193 254 - -
Bach10g00272 334 Gene3D AP2/ERF domain 193 254 IPR036955 GO:0003700|GO:0006355
Bach10g00272 334 CDD AP2 193 252 IPR001471 GO:0003700|GO:0006355
Bach10g00272 334 SUPERFAMILY DNA-binding domain 194 253 IPR016177 GO:0003677
Bach10g00272 334 ProSiteProfiles AP2/ERF domain profile. 194 252 IPR001471 GO:0003700|GO:0006355
Bach10g00272 334 Pfam AP2 domain 194 244 IPR001471 GO:0003700|GO:0006355
Bach10g00272 334 PANTHER DNA-BINDING DOMAIN 140 275 IPR044808 GO:0003700|GO:0009873
Bach10g00272 334 SMART rav1_2 194 258 IPR001471 GO:0003700|GO:0006355
Bach10g00272 334 PRINTS Ethylene responsive element binding protein signature 234 254 IPR001471 GO:0003700|GO:0006355
Bach10g00272 334 PRINTS Ethylene responsive element binding protein signature 195 206 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00272 Bach-Chr10 1920736 1921740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00272 1 330 AP2-EREBP Transcription Factor Family AT5G47230 44.083 2.39e-58 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach10g00272 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00272 K09286 - qsa:O6P43_034054 357.451