Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00268 AATCGTAAGGTTTCTTCCTTCGTCGCATCTGTGATCTGCAAATTACAAAAGGAATAATTTGCTTCTCTTCTATATGATTTTATTTGTTTGGTTGTGGAGACATGGAATCTCAAGGGATGTAAAGGTCTAGGCTTTACCTGTTGATATTTGATATATATATATATATATATATTAATTGTAAAGCTTCAGAAACTACTGTAATTGTTTCCCAATTCCGAAGAAAGTTATGCGTATAGAGGAACTTAAGGGGGAGGAGGTGGAAGGTGGAGAGAAAGGAAAATCAAACATTGAGAATGGTGATTCCGGCGGGGCAAGTTTTCTTGGGTCTGATGCTAAAAGGATTTTGGTCGGAGCAGGAGCTCGTGTGCTCTTCTATCCCACTCTGATTTACAACGTCGTCAGGAATAAGATTCAGGCGGAGTTTCGATGGTGGGATAGGGTTGATGAGTTCATATTATTAGGTGCTGTTCCATTCCCTATCGATGTTCCCCGCTTAAAGAAGCTTGGTGTCCGTGGAGTCATCACATTGAATGAAGCGTATGAGACTTTGGTTCCTACCACACTATATCATGCTCATGGTATTGAGCATCTAGTGATTCCTACTAGGGACTACTGTTTTGCTCCATCATTGCGTGACATATGCCAGGCTGTGGCCTTCATTCATGAAAATGCATTGTCTGGACGAACTACATATGTTCACTGTAAAGCTGGACGTGGTCGTAGCACAACAATTGTTATCTGTTACCTGGTGCATTACAAGTTGATGACCCCTGATGTTGCATACGATTATGTAAGATCAATCCGGCCAAGGGTTCTTTTAGCTTCATTACAGTGGCAAGCTGTTCAGGACTACTACCACCTTATGGTGAGGAGGGCTGTTACCCGTGCTCCCATGCCCAATTTAGTGCTGAAAGCATCTGAGGCAACAGCAACTTCTCAAGGCCTTGTCACATTTGATGATTCTTCTGTAGTTGTGGTAACAGAGTCTGATCTTGAAGGATATGACCCAAGAAGTCAGTCAGGTACTGTGGCAAATAAGATATGGACAGATTTAAGCATAGTTTATCGTGTCCGAGTTTCTGGAGAGGCGGCATTGGCAAGAATATCCTGCCTGTGGTTGCGATACCGGACACAGCAGAACATTTCTGGGGAGAAATTGAGCCGAGAGAGTAGCTGCTCGCTGAGGACTAGTCACTTGGATAGCATTAGTGTTGATATCCAAGTCTATTGA 1231 0.4297 MRIEELKGEEVEGGEKGKSNIENGDSGGASFLGSDAKRILVGAGARVLFYPTLIYNVVRNKIQAEFRWWDRVDEFILLGAVPFPIDVPRLKKLGVRGVITLNEAYETLVPTTLYHAHGIEHLVIPTRDYCFAPSLRDICQAVAFIHENALSGRTTYVHCKAGRGRSTTIVICYLVHYKLMTPDVAYDYVRSIRPRVLLASLQWQAVQDYYHLMVRRAVTRAPMPNLVLKASEATATSQGLVTFDDSSVVVVTESDLEGYDPRSQSGTVANKIWTDLSIVYRVRVSGEAALARISCLWLRYRTQQNISGEKLSRESSCSLRTSHLDSISVDIQVY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00268 334 SMART ptp_7 110 215 IPR003595 -
Bach10g00268 334 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Bach10g00268 334 CDD PTPMT1 68 210 IPR044596 GO:0004721
Bach10g00268 334 Pfam Dual specificity phosphatase, catalytic domain 90 207 IPR000340 GO:0008138|GO:0016311
Bach10g00268 334 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 302 - -
Bach10g00268 334 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
Bach10g00268 334 MobiDBLite consensus disorder prediction 1 19 - -
Bach10g00268 334 MobiDBLite consensus disorder prediction 1 24 - -
Bach10g00268 334 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Bach10g00268 334 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
Bach10g00268 334 FunFam Dual specificity phosphatase domain protein 68 215 - -
Bach10g00268 334 Gene3D Protein tyrosine phosphatase superfamily 68 218 IPR029021 -
Bach10g00268 334 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 60 213 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00268 Bach-Chr10 1895202 1898071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00268 1 334 Protein tyrosine phosphatase (PTP) family AT2G35680 57.507 3.20e-131 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00268 - - gmx:100790413 498.819