Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00266 CACAAAACAAAAGTTCACATCTTTTTCTCTCCCTGATCCTATTTTTCCATGTGACTGCAGACTCAATCTTTGAGTTCACTCACAAATTTGTATTGCCTCAAAAGGGTTTTGATTTTTCTAGCAAATATTAGAGATGATGGTTCAAAAAGAAGATTTGGGTTTGAGTTTAAGCTTGAGCTTCCCTCAGAGTCATCCAGATCCTTTGCACCTCAATCTTGTTTCTTCTTCTACTTATTCCTCATCTCCTTCTGGTTCTAACCTTCAGAAACCCGCTTGGAACGAGGCTATAACATCCTCAGATCGAAATTCTGAAACATGCAGAGCCGAAGGTCGATCTTTCCTCCGAGGAATCGACGTGAATCGATTGCCTTCGGCGGTTGATTTCGAAGAGGACGCAGGTGTTTCGTCTCCAAACAGCACGATTTCGAGTGTGAGCGGTAAGCGAAGTGAGAGGGAACCAAACGGAGAAGAGAATGAGAATGAGATGGACAGAGCTTGTTCTAGAGGGATCAGCGATGAAGAAGACGGCGAAGCCTCCAGAAAAAAGCTTAGACTCTCTAAAGATCAATCTGCTATTCTTGAGGAGAGCTTCAAAGAGCACAACACCCTGAACCCCAAGCAGAAGTTGGCGTTGGCAAAGCAGCTGGGTCTCCGACCAAGACAAGTAGAGGTGTGGTTCCAGAACAGAAGGGCAAGGACTAAGCTGAAGCAAACTGAGGTAGACTGTGAGTTCTTGAAACGGTGCTGCGAGAATTTGACGGAGGAGAACAGACGGTTGCAGAAGGAAGTTCAGGAGCTGAGAGCACTGAAACTTTCCCCTCAACTGTACATGCAAATGACTCCACCCACCACCCTCACTATGTGCCCTTCATGTGAGCGCGTTGCTGTTCCGCCCTCTGCGGTGGAAGCCGGCCATCTCCACTCCATTCACCCTCGGGCCATTCCCATCGGCCCATGGGCCACAGCAGCTCCTATTCCACACAGGCCCTTTGATGCACTCCGTCACAGATCCTGA 1015 0.4818 MMVQKEDLGLSLSLSFPQSHPDPLHLNLVSSSTYSSSPSGSNLQKPAWNEAITSSDRNSETCRAEGRSFLRGIDVNRLPSAVDFEEDAGVSSPNSTISSVSGKRSEREPNGEENENEMDRACSRGISDEEDGEASRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQLYMQMTPPTTLTMCPSCERVAVPPSAVEAGHLHSIHPRAIPIGPWATAAPIPHRPFDALRHRS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00266 293 MobiDBLite consensus disorder prediction 13 59 - -
Bach10g00266 293 SMART HOX_1 134 196 IPR001356 GO:0003677
Bach10g00266 293 SUPERFAMILY Homeodomain-like 128 193 IPR009057 -
Bach10g00266 293 Gene3D - 140 190 - -
Bach10g00266 293 Pfam Homeobox associated leucine zipper 192 226 IPR003106 GO:0006355|GO:0043565
Bach10g00266 293 Pfam Homeodomain 136 190 IPR001356 GO:0003677
Bach10g00266 293 ProSiteProfiles 'Homeobox' domain profile. 132 192 IPR001356 GO:0003677
Bach10g00266 293 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 44 253 - -
Bach10g00266 293 Coils Coil 191 228 - -
Bach10g00266 293 ProSitePatterns 'Homeobox' domain signature. 167 190 IPR017970 GO:0000981|GO:0006355
Bach10g00266 293 MobiDBLite consensus disorder prediction 84 140 - -
Bach10g00266 293 MobiDBLite consensus disorder prediction 89 104 - -
Bach10g00266 293 SMART halz 192 235 IPR003106 GO:0006355|GO:0043565
Bach10g00266 293 Pfam HD-ZIP protein N terminus 2 108 IPR006712 GO:0005634
Bach10g00266 293 CDD homeodomain 136 193 IPR001356 GO:0003677
Bach10g00266 293 MobiDBLite consensus disorder prediction 105 140 - -
Bach10g00266 293 MobiDBLite consensus disorder prediction 13 60 - -
Bach10g00266 293 PRINTS Lambda-repressor HTH signature 163 172 IPR000047 GO:0003677
Bach10g00266 293 PRINTS Lambda-repressor HTH signature 172 188 IPR000047 GO:0003677
Bach10g00266 293 FunFam Homeobox-leucine zipper protein 18 123 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00266 Bach-Chr10 1885917 1887487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00266 1 293 Homeobox Transcription Factor Family AT4G16780 65.101 9.37e-117 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach10g00266 HD-ZIP_N 6.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00266 K09338 - gmx:100813367 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00299 4 1943891 1945924 Bach10g00266 10 1885917 1887487 BWGD