Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00252 ATGGTGAAGATAGATATTGGTAGCTTGGGTGACTCGTTTAGCGTTACTTCCATTAAGGCTTATCTGGCAGAGTTCATTGCCACTCTGCTTTTCGTGTTCGCTGGCGTAGGATCAGCCATAGCTTATAATAAGCTAACATCGGATGCAGCCTTGGACCCCCCTGGTCTGGTAGCAGTAGCAGTGGCACACGCATTTGCTTTGTTCGTAGGTGTGTCCATAGCAGCCAACATCTCAGGTGGGCATTTGAACCCAGCTGTTACTTTTGGATTGGCAATTGGAGGCAACATCAGCCTCCTAACTGGCCTCTTCTACTGGATTGCCCAATTGCTCGGCTCCATCGTTGCATGTCTCCTCCTCCAATTCGTCACCAATGGCCTTACCGTTCCAATACACAGCCTGGCTGCTGGGGTAGGCGCTTTTGAAGGTGTTGTATTTGAGATTGTGGCTACTTTTGCGCTGGTTTACACCGTCTACGCCACCGCTGCTGATCCAAAAAAGGGCTCCTTGGGGATTATTGCACCCATTGCTATTGGGTTCATCGTGGGTGCCAACATCTTAGCAGCCGGTCCATTCAGTGGCGGTTCAATGAACCCGGCTCGCTCATTCGGCCCAGCTGTTGTAAGCGGCAACTTCACAGATAACTGGATCTACTGGGTTGGACCATTGATTGGTGGAGGCTTGGCTGGGTTAATTTATGGTGACATTTTCATTGGCTCTTATGCCCCTGTCCCTGCCACTGAAGCCTACCCTTGA 753 0.506 MVKIDIGSLGDSFSVTSIKAYLAEFIATLLFVFAGVGSAIAYNKLTSDAALDPPGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTFGLAIGGNISLLTGLFYWIAQLLGSIVACLLLQFVTNGLTVPIHSLAAGVGAFEGVVFEIVATFALVYTVYATAADPKKGSLGIIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGNFTDNWIYWVGPLIGGGLAGLIYGDIFIGSYAPVPATEAYP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00252 250 SUPERFAMILY Aquaporin-like 14 238 IPR023271 -
Bach10g00252 250 CDD MIP 19 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00252 250 PANTHER AQUAPORIN-8 4 238 IPR034294 -
Bach10g00252 250 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Bach10g00252 250 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00252 250 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00252 250 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00252 250 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00252 250 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00252 250 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00252 250 NCBIfam MIP family channel protein 23 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00252 250 Pfam Major intrinsic protein 14 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach10g00252 250 Gene3D Glycerol uptake facilitator protein. 2 241 IPR023271 -
Bach10g00252 250 FunFam Probable aquaporin TIP1-1 2 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00252 Bach-Chr10 1773790 1774806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00252 1 247 Major Intrinsic Protein MIP AT5G47450 82.591 6.07e-144 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00252 K09873 - tcc:18606242 419.083