Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00244 ATGGAGAAGCACAAATGTAAGCTTTGCTCTAGGACATTCGCCAATGGCAGAGCATTGGGTGGCCACATGAAGGCGCATTTGGCCACCCTTCCCCTTCCTCCAAAGCCCGAACCACTCAGTGACTCAGCTTCATTGTCATATCTCTCTTCCGAGGAAGAACCAGAAGAAGAAGCACTTGGATACGGAGAGCCAGATGAAAAGGCGTTGATGTATGGGTTGAGGGAGAATCCCAAGAAAAGTTTCAGACTTGCAGATCCTGAGTTTTCTTTTGCTGTTGATAATGGGTCTGTCGTCCTAGATAGAGAGAGCGAAACCGAGTCAAAGAACCCAACTCGGCGGCGATCCAAGAGAAACCGAAAATCTAGCCTGGCAGGAAGCCAAACCCAGAATCAGGACGAGAAATTGGAACCCAAGAGGCCTAAACCGAGTTTTCCAGAGTCACAGACCGAGCCTGAACCGGCTAGCTCGGTTTCTGAAACTTCCCCTGAAGAAGATGTTGCTATGTGCCTCATGATGCTCTCAAGGGACAGATGGATACGGAATATTGTTAAAGAAGATCAAGAGGAGGAAGAACAAGAGCTGAGATCAGTACAGGAATCAAAGGGATTTGAAGAGATCAAGTTGAAGAGAGTTCGCGGGAAGCACCAGTGTGACAACTGTAGAAAAACGTTTCGATCTTCTCGGGCATTAGACAGTCACAAAAACATCTGCTTTCGTGATGAAGCTCAAGCTCAGAATGCAGGTAATGATAAAATTTTTGAATGCCCATATTGTCATAAGATATTTGGGTCAGGACAAGCACTTGGTGGTCACAAGAGATCTCATCTCTTGGCATCTCCATCATCAAATGTGAAAGAATCTGGTATATCAAGAGAAGCTGCAATAGATCTCAACTTACCAGCTCCAGCAGAAGAAGATGAACTTAGCGTGCTTTCTGATGCATAA 945 0.4571 MEKHKCKLCSRTFANGRALGGHMKAHLATLPLPPKPEPLSDSASLSYLSSEEEPEEEALGYGEPDEKALMYGLRENPKKSFRLADPEFSFAVDNGSVVLDRESETESKNPTRRRSKRNRKSSLAGSQTQNQDEKLEPKRPKPSFPESQTEPEPASSVSETSPEEDVAMCLMMLSRDRWIRNIVKEDQEEEEQELRSVQESKGFEEIKLKRVRGKHQCDNCRKTFRSSRALDSHKNICFRDEAQAQNAGNDKIFECPYCHKIFGSGQALGGHKRSHLLASPSSNVKESGISREAAIDLNLPAPAEEDELSVLSDA 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00244 314 ProSitePatterns Zinc finger C2H2 type domain signature. 6 26 IPR013087 -
Bach10g00244 314 Gene3D Classic Zinc Finger 212 275 - -
Bach10g00244 314 SMART c2h2final6 215 235 IPR013087 -
Bach10g00244 314 SMART c2h2final6 253 275 IPR013087 -
Bach10g00244 314 SMART c2h2final6 4 26 IPR013087 -
Bach10g00244 314 SUPERFAMILY beta-beta-alpha zinc fingers 215 275 IPR036236 -
Bach10g00244 314 MobiDBLite consensus disorder prediction 31 66 - -
Bach10g00244 314 ProSitePatterns Zinc finger C2H2 type domain signature. 255 275 IPR013087 -
Bach10g00244 314 ProSiteProfiles Zinc finger C2H2 type domain profile. 253 280 IPR013087 -
Bach10g00244 314 MobiDBLite consensus disorder prediction 148 162 - -
Bach10g00244 314 Pfam C2H2-type zinc finger 4 28 - -
Bach10g00244 314 Pfam C2H2-type zinc finger 215 240 - -
Bach10g00244 314 Pfam C2H2-type zinc finger 253 275 - -
Bach10g00244 314 Coils Coil 180 200 - -
Bach10g00244 314 SUPERFAMILY beta-beta-alpha zinc fingers 3 29 IPR036236 -
Bach10g00244 314 MobiDBLite consensus disorder prediction 92 165 - -
Bach10g00244 314 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 31 IPR013087 -
Bach10g00244 314 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 314 IPR044303 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00244 Bach-Chr10 1724216 1725160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00244 1 311 C2H2 Transcription Factor Family AT3G60580 35.799 3.95e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach10g00244 zf-C2H2_6 0.057 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00244 - - qsa:O6P43_034089 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00275 4 1793365 1794303 Bach10g00244 10 1724216 1725160 BWGD