Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00236 TGATATCTTTCTCTGCAAACCCTAACTTAACTAGTCTTCGTTTCATTTGAATTGGAGGCAACTTCAATGGAGGAAGAAAAAGAAGGACCACCCAATAGAGAACTATATGCTCTCTTAAACTTGTCCCCCGAAGCGTCCGATGAAGAAATCCGAAAGGCGTATCGGCAATGGGCACAAGTCTATCACCCTGACAAATACCAAGCTCCCCATATGAAAGATGCTGCTACAGAAAACTTTCAACGCATATGTGAAGCGTATGAAGTTTTGTCCGATCCCAATAAGAGGCAGATATATGACATTTATGGTATGGAAGGTCTGATCTCTGGTATGGAACTTGGTCCAAAACTGGATAAAGCAGAAGAGATAAAGGCTGAATTGGAGAGACTACGACGAAGGAAGGAACTAGAAAAGACAACAGCACATTTTCGATCATCGGGAACAATTTTGACCAATTTGTCTTTGCCAGACCGACGAGATGGTGATGGCATCTTCAGAGGAATGGTCATGACAAGCGAAGTTCAGTCTCAGTTATCAAAACGTAATGTTGTTGCAATTGGTGGCAATGTAGCAGTTAGCGGAAATGATGGTGGTGGAGCTGCTACTGCTTTATTTAGACATCAAATTTCAGAAGTTTCTTCTGTAGAACTTATGGCTTCAACTGGTTTACGGGCACTAATTGGGGTGCAAACATCTCGTCAGCTATCAATACACTCAACTGCAACAACGGGCCTTGCCATGTCTTTGAAAGATGGTTCCTTGAATCTTTCAAATTCCTGGACCCGCCAACTGTCAGAAACAGCAACTGGAAATATACAGCTCGCTTTGGGATCACATTCATCTATAGCTGTTGGATGGCTAAAGAAAGATGAGAAAAGGTCCACCTCTGGAGAAGTGAAGTTTGGCACTGGCACTTTTGAGACAGCAGCTCACCATACGTATAAATTTTCTTCTAAATCTCATGGACGTATTGCAGGCAGATTTGGGAGTTCTGCCCTTGAGATTGAAATTGGTGGTGGGAGAAAGTTATCCAAATTCAGCACTGTGCGCTGGTTGTATTCCATAGGAATTCAGGGTATTTCCTGGAGATTTGAGTTGCGCCGTGGGGGCCAAAAGTTAATTATTCCTATTTTGCTTACCAGGCATTTGAACCCTGTATTTGCTACTGGAGCGTTGGTTCTTCCAGCATCTCTTTACTTTCTACTGAAGAAATTTGTTGTCAAGCCATATTATCTTAGAAGGAATAAGCAGAAGGATTTAGAAAATGCGGATAAAATTTCTGTTCAGGTTCAAGAAGCGAGAGCTGCAGCAGAGAAAGCTCAGCAATTACTGCAAAATGTAGCAAATAGGAAAAGAAATAGGCAATTAGAAACAGGTGGACTGGTTATTACTAGAGCACTCTATGGAAGTCATATAGTTTTGAACAAGATAAATGCATCAAGTGAAATAAGTCATGAATCAGCTTCAAAAGTCCTGGATGTTACAATACCTCTGAATTTCTTAGTTAACGATTCTGGCCAACTCAAGCTTCATGAAGGTGTAAAAAAATCAGGCATCATGGGATTTTGTGATCTTTGTCCTGGAGAACCAAAACAGTTGTTGGTAGAGTACACTTATGCAGGCAACCAATGCAAGGTAGTGGTTGGTGATTATGAAGAATTAGTGATACCTTCGGGCGGACAAAGGATCTGAAGATTAAATATAATAACGGTTACTGATTGTTACCTTTTGCGGTTTTGATTAGCCTACATGCTCGAGGGACTACTCCTCTCACTCTCACCTGTAAAGCTGGAATAGTAGAGGTGCATTTACTCCTCCCAGTTTTCCTATTTTGTTTCAGTTGATATAATTGTTACACCCCGAAAAATATATAAAAAAAAATAAGGGCATTTATGAAATTACGCTATCTTGTGAAGCCAACAGCTCTATGTACATTCTTAACCCTGTGGGACGGGGAGTCACTTTTGATTACGCACAGTCCTTTGATTTGTTCATTTACTGCCTTTGCCAAG 2009 0.4092 MEEEKEGPPNRELYALLNLSPEASDEEIRKAYRQWAQVYHPDKYQAPHMKDAATENFQRICEAYEVLSDPNKRQIYDIYGMEGLISGMELGPKLDKAEEIKAELERLRRRKELEKTTAHFRSSGTILTNLSLPDRRDGDGIFRGMVMTSEVQSQLSKRNVVAIGGNVAVSGNDGGGAATALFRHQISEVSSVELMASTGLRALIGVQTSRQLSIHSTATTGLAMSLKDGSLNLSNSWTRQLSETATGNIQLALGSHSSIAVGWLKKDEKRSTSGEVKFGTGTFETAAHHTYKFSSKSHGRIAGRFGSSALEIEIGGGRKLSKFSTVRWLYSIGIQGISWRFELRRGGQKLIIPILLTRHLNPVFATGALVLPASLYFLLKKFVVKPYYLRRNKQKDLENADKISVQVQEARAAAEKAQQLLQNVANRKRNRQLETGGLVITRALYGSHIVLNKINASSEISHESASKVLDVTIPLNFLVNDSGQLKLHEGVKKSGIMGFCDLCPGEPKQLLVEYTYAGNQCKVVVGDYEELVIPSGGQRI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00236 540 Coils Coil 94 117 - -
Bach10g00236 540 Pfam DnaJ-like protein C11, C-terminal 386 534 IPR024586 -
Bach10g00236 540 SMART dnaj_3 11 72 IPR001623 -
Bach10g00236 540 Gene3D DnaJ domain 4 89 IPR036869 -
Bach10g00236 540 Coils Coil 400 434 - -
Bach10g00236 540 PANTHER CHAPERONE PROTEIN DNAJ 13 1 539 IPR042162 -
Bach10g00236 540 CDD DnaJ 12 69 IPR001623 -
Bach10g00236 540 PRINTS DnaJ domain signature 14 32 IPR001623 -
Bach10g00236 540 PRINTS DnaJ domain signature 72 91 IPR001623 -
Bach10g00236 540 PRINTS DnaJ domain signature 52 72 IPR001623 -
Bach10g00236 540 PRINTS DnaJ domain signature 32 47 IPR001623 -
Bach10g00236 540 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Bach10g00236 540 Pfam DnaJ domain 13 77 IPR001623 -
Bach10g00236 540 SUPERFAMILY Chaperone J-domain 10 91 IPR036869 -
Bach10g00236 540 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00236 Bach-Chr10 1672995 1678626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00236 14 79 C2H2 Transcription Factor Family AT1G74250 47.059 7.89e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00236 K09531 - gmx:100817782 813.527