Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00234 ATGGCTTCTTCCTTATTTTTTCTCTTGTTAATATTCTCTATTTCATGTTCAACTAAATCATCGGAAATGGTTTTAATGCCTCTATCACACTCCATGTCCCAAACTCAATTCAACAGTACCCATCACCTCCTGAAATCTACCTCTACTCGCTCTGTCGCTCGCTTTCACCACCAACGCCGTCTCAGCCGCCAGCAGCAAGTGTCTCTGCCCCTCTCACCAGGCAGTGATTATACTCTGTCCTTTCACCTCGGTTCCAATCCTCCTCAACCCATAGCTCTCTACATGGACACCGGCAGTGACATGGTCTGGTTCCCTTGCGCCCCTTTCGAATGCATACTTTGTGAAGGCAAGTCCAACCCTTCAATTAACACCAAAGCACCCAACATTTCCCCAAGTGCCGCCGTTGCATGCAAGTCCCCTGCATGCTCTGCTGCTCACTCTTCTCTCCCATCCTCTGATCTTTGCGCAATGGCTCGCTGTCCCTTGGAATCCATAGAGACCTCTGATTGCTCTTCTTTCTCCTGCCCACCTTTTTATTATGCTTACGCCGACGGAAGCTTAATAGCTCGCCTTTATCGCGATAATCTCTCCATCTCTGTGTCTTCCCCTTCTCTGGTTCTCAAAAACTTTACTTTTGGCTGTGCTCATACCACTCTCGGCGAGCCCACTGGAGTCGCTGGCTTCGGTCGCGGTTTATTGTCTCTGCCCGCTCAACTAGCTACCCTTTCTCCCCAACTCGGAAACCAATTTTCTTACTGTCTGGTTTCTCACTCCTTTGATCGAGAACGACTTCGCCGTCCGAGTCCACTCATCATCGGCCGTTACGACAAGAAACAAAAGAAGATTGGTAGTGAGCTTGCTGAATTTGTCTACACTTCCATGCTTGAAAATCCAAAACACCCATATTTTTACTGCGTCGGGCTCGTGGCGATCTCCGTGGGAAAGAAAATTATTCGGGCGCCGGAGATTTTGAAGAGGATCGACAAGAGGGGCAGTGGCGGTATGGTTGTGGATTCAGGCACGACGTTCACGATGTTGCCAGCGAGTTTATATAACTCGGTGGTGGCCGAGTTCCATCGTCGAGTTGGGAGGGTTCACGAGCGAGCAAGTGAGATTGAGGACAAAACGGGACTTGGGCCGTGTTATTACATGGACAAGGTGGCTCCAGTCCCGACCGTGACTTTGCATTTCGTGGGGAACGATTGCAATGTGGTCTTACCCAGCAAGAACTACTTCTACGATTTTTTGAACGGTGGTGACGGAACGAGGAAGAGGAGAGTGGGGTGTTTGATGCTGATGAATGGTGGAGATGAGGCAGAATTAAACGGTGGACCAGGAGCCACGCTCGGGAATTACCAGCGGCAGGGCTTTGAGGTTGTATATGACCTTGAAAAGAAGCGAGTTGGTTTCGCGAGGAGGCAATGCGCGTCACTTTGGGATAGGCTGAACCAGAACTAG 1458 0.4993 MASSLFFLLLIFSISCSTKSSEMVLMPLSHSMSQTQFNSTHHLLKSTSTRSVARFHHQRRLSRQQQVSLPLSPGSDYTLSFHLGSNPPQPIALYMDTGSDMVWFPCAPFECILCEGKSNPSINTKAPNISPSAAVACKSPACSAAHSSLPSSDLCAMARCPLESIETSDCSSFSCPPFYYAYADGSLIARLYRDNLSISVSSPSLVLKNFTFGCAHTTLGEPTGVAGFGRGLLSLPAQLATLSPQLGNQFSYCLVSHSFDRERLRRPSPLIIGRYDKKQKKIGSELAEFVYTSMLENPKHPYFYCVGLVAISVGKKIIRAPEILKRIDKRGSGGMVVDSGTTFTMLPASLYNSVVAEFHRRVGRVHERASEIEDKTGLGPCYYMDKVAPVPTVTLHFVGNDCNVVLPSKNYFYDFLNGGDGTRKRRVGCLMLMNGGDEAELNGGPGATLGNYQRQGFEVVYDLEKKRVGFARRQCASLWDRLNQN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00234 485 SUPERFAMILY Acid proteases 72 480 IPR021109 -
Bach10g00234 485 Gene3D Acid Proteases 62 273 IPR021109 -
Bach10g00234 485 Gene3D Acid Proteases 277 480 IPR021109 -
Bach10g00234 485 ProSiteProfiles Peptidase family A1 domain profile. 77 471 IPR033121 -
Bach10g00234 485 PANTHER ASPARTYL PROTEASES 5 469 IPR001461 GO:0004190|GO:0006508
Bach10g00234 485 CDD pepsin_A_like_plant 77 475 IPR034161 -
Bach10g00234 485 Pfam Xylanase inhibitor C-terminal 304 471 IPR032799 -
Bach10g00234 485 Pfam Xylanase inhibitor N-terminal 77 258 IPR032861 -
Bach10g00234 485 FunFam Probable aspartyl protease At4g16563 67 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00234 Bach-Chr10 1657714 1659171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00234 45 478 Miscellaneous Gene Families AT1G77480 26.998 5.60e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00234 - - cill:122282930 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00267 4 1744139 1745931 Bach10g00234 10 1657714 1659171 BWGD
Bach10g00234 10 1657714 1659171 Bach10g00234 10 1657714 1659171 ECH
Bach10g00234 10 1657714 1659171 Bach2g02306 2 29612063 29614480 ECH