Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00222 ATGGACTCGACTCATGGTTCCCCTGTTCTCACTGACCCTGTTCCCATCAGCAAGTCCAGACTAGGAATCCATTCTAGTCTCTTAACTTACACCCAGATAGATCAACCAATGTCTCCCAGTAAGTATACAAGAAGCGGTTCGAGGAAAAGTGCAACAAGTCTCGATGATGTTCGCTCAAATGGATGGTTGGATGCCATGAAGGCTTCCTCACCTCCAAGAAAGAAGCTTCTTAAAGGTTCTAACAATCAGGTTGCTTCCATTGACAGTGAAATTGAAGATCATCTTTCTTGGATGCTTGATTATCCATCAGCACTCGACTGCTTTGGAAAGATTTCTGACCATGCCCAAAATAAGAAGATTGCAATGTTTCTAGACTATGATGGCACTCTCTCACCAATTGTTGACAATCCAGATTGTGCCTTTATGTCCGACGCCATGCGGGCAACAGTGAGAAGCGTGGCAAAGTATTTTCCCACAGCGATCATTAGCGGAAGAAGCCGTGACAAGGTTTTTGATTTAGTAAAACTAACGGAACTGTACTACGCTGGGAGCCATGGTATGGACATTATTGGCCCTGCCAGTGATTCTCTTTCTAAAGTCCATCCGGATTGTGTTAAATCCACTGACGATCAGGGAAAGGAAATAACATTATTTCAACCTGCAAGAGAATTTCTCCCTATGATCGACCAGGTTTTTAAAACCCTCGTCGAGATTACCAAAGATATCAAAGGCGCAAAAGTTGAAAATCACAAGTTTTGCGCATCTGTACATTACCGTAATGTAGAAGAGAATAATTGGACGACTATTGGACAATGTGTCCATGATGTGGTAAAAGATTACCCTCGTTTACGTTTAACTCACGGACGGAAGGTTTTAGAAGTCCGTCCTGTGATTGATTGGAACAAAGGAAAAGCAGTTGAGTTCTTACTTGAATCTCTAGGGTTAACTGACAGGGATAACGTGCTTTCCATCTACATTGGAGATGATAAGACTGACGAAGATGCATTCAAGGTGCTGCGTGATAGCCAACGAGGTTTTGGGATTTTGGTTTCATCAATGAGGAAAGAAAGCAATGCCTTGTACTCTCTTCATGACCCAAATGAGGTCATGAAATTTCTACAACTCCTAGTGAATTGGAAGAGGCAACAAGGCTGGAAGCATGCGAGACAGAGTTTAAGCGATTGA 1185 0.427 MDSTHGSPVLTDPVPISKSRLGIHSSLLTYTQIDQPMSPSKYTRSGSRKSATSLDDVRSNGWLDAMKASSPPRKKLLKGSNNQVASIDSEIEDHLSWMLDYPSALDCFGKISDHAQNKKIAMFLDYDGTLSPIVDNPDCAFMSDAMRATVRSVAKYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPASDSLSKVHPDCVKSTDDQGKEITLFQPAREFLPMIDQVFKTLVEITKDIKGAKVENHKFCASVHYRNVEENNWTTIGQCVHDVVKDYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLTDRDNVLSIYIGDDKTDEDAFKVLRDSQRGFGILVSSMRKESNALYSLHDPNEVMKFLQLLVNWKRQQGWKHARQSLSD 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00222 394 Pfam Trehalose-phosphatase 123 366 IPR003337 GO:0003824|GO:0005992
Bach10g00222 394 NCBIfam trehalose-phosphatase 118 377 IPR003337 GO:0003824|GO:0005992
Bach10g00222 394 Gene3D - 120 209 IPR023214 -
Bach10g00222 394 Gene3D - 219 391 IPR023214 -
Bach10g00222 394 NCBIfam HAD-IIB family hydrolase 122 341 IPR006379 -
Bach10g00222 394 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 31 384 IPR044651 GO:0004805|GO:0005992
Bach10g00222 394 FunFam Trehalose 6-phosphate phosphatase 221 297 - -
Bach10g00222 394 SUPERFAMILY HAD-like 121 381 IPR036412 -
Bach10g00222 394 CDD HAD_TPP 121 371 - -
Bach10g00222 394 FunFam Trehalose 6-phosphate phosphatase 227 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00222 Bach-Chr10 1552438 1554576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00222 114 376 Trehalose Biosynthesis Gene Families AT1G70290 25.177 1.70e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00222 K01087 - qsa:O6P43_024315 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00222 10 1552438 1554576 Bach10g00222 10 1552438 1554576 ECH