Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00217 ATGTCATCCTCTTCTGCTACCTTATCGCTGGACCACCTCCCCCCTTCCGAGCAGCTTTGTTATGTCCACTGCAACAATTGTGATACCGTGCTCGCTGTAAGCGTTCCTTGCACAAGCTTGTTCAAAACCGTGACAGTCCGATGCGGCCATTGCACCAATCTTCTGCCAGTGAACATGCGTGGATTGCTTCTGCCATCGTCTAATCAATTTCACTTGGGTCACTCTTTATTCTCTCCATCCCATAACCTTCTGGTATACGAGGAGATGTCAAATCCATCCCCAAATTTCTTGATCAACCACACCAACTCTTCAAATGACTTCTCTATGCCTGCCAGGATTCCAGCTGATGAGCTTCCACGGCCACCGGTCATAAACAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCCGCCTACAACCGCTTCATTAAGGACGAGATCCAACGCATCAAGTTTGTCAATCCCGATATACCCCACAGAGAAGCCTTCAGCGCAGCTGCCAAGAATTGGGCCCACTTCCCACACATCCACTTAGGTCTCATGCCTGATCAGACAATGAAGAAGACAAATGTCCGCCAGCAGGAAGGAGAGGACGTTCTGATGAAAGGTGGGCTTTTAGCTTCGGCTAATGTACCAGCTTCTCCCTACTAA 648 0.4954 MSSSSATLSLDHLPPSEQLCYVHCNNCDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSSNQFHLGHSLFSPSHNLLVYEEMSNPSPNFLINHTNSSNDFSMPARIPADELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKFVNPDIPHREAFSAAAKNWAHFPHIHLGLMPDQTMKKTNVRQQEGEDVLMKGGLLASANVPASPY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00217 215 SUPERFAMILY HMG-box 123 172 IPR036910 -
Bach10g00217 215 CDD HMG-box_SF 133 169 - -
Bach10g00217 215 PANTHER PROTEIN YABBY 6-RELATED 1 191 IPR006780 GO:0007275
Bach10g00217 215 Pfam YABBY protein 15 179 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00217 Bach-Chr10 1520165 1522470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00217 16 180 C2C2-YABBY Transcription Factor Family AT2G26580 53.939 6.25e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bach10g00217 YABBY 7.3e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00217 K25796 - gmx:100798441 375.941