Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00216 ATGAATACGTTTTCACACGTTCCTCCAGGCTTCCGGTTCCATCCCACTGATGAAGAACTTGTTGATTACTACCTTAGGAAAAAGGTAGCTTGTAAAAGGATCGATCTTGATGTTATCAAAGATGTCGATCTCTATAAGATTGAGCCATGGGATCTTCAAGAATTATGCAAACTTGGCACTGAAGAACAAAGCGATTGGTATTTCTTTAGCCACAAAGATAAGAAGTACCCAACTGGAACTCGCACCAATAGAGCTACAAAAGCAGGATTTTGGAAAGCTACAGGAAGAGACAAGGCGATCTATGCTAGGCATTGCCTGATTGGCATGAGAAAGACTCTGGTGTTTTACAAAGGACGTGCTCCAAATGGACAAAAATCTGACTGGATTATGCATGAATATCGGCTAGAAACAAATGAAAATGTTACTTCTCAGGAAGAAGGCTGGGTTGTATGTAGAGCGTTTAAGAAGCGCACAACAACAGTTCGGAAAATGGGAGAGTATGAATCACCCTGTTGGTATGATGACCAAGTTTCCTTCATGCAAGATCTTGAATCCCCAAGACGAATTTCTAACCCTTATGCACCATACCACCAACACTATCCCTGCAAGCAGGAACATGAATTCCAATACAACATACCCCATGATGCTTTCCTCCAACTTCCTCAGCTAGAAAGCCCTACAGTTCCTCAATCAACAAGTTTGAGTTGCAACTCAGTCATCCCTTATGGGTATGATGGGAATACCAATGGCAGCACCCTGCAGTCCTCATCACTCACGCAAGAAGAACGCATACAGCATTGCCATCAACAAAGCCTGAAATCTCTTCATGATAGCATTGATCAGGCAGTGGATCAGGTCACTGATTGGCGAGTACTTGACAAATTTGTTGCTTCTCAGCTCAGTCATGACCAAGATGCTTCCAAGGAAAACAGTTATTCTTCCAATGCAGCTGTCCTCCATGTAGCTCAGCAAATTACTATTCAAGGAAATGAATCCAGAAGGCCTGAAGAATATGCTTCAACGTCCACCTCCAGTTGCCAAATTGACCTGTGGAAGTGA 1059 0.4297 MNTFSHVPPGFRFHPTDEELVDYYLRKKVACKRIDLDVIKDVDLYKIEPWDLQELCKLGTEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYARHCLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENVTSQEEGWVVCRAFKKRTTTVRKMGEYESPCWYDDQVSFMQDLESPRRISNPYAPYHQHYPCKQEHEFQYNIPHDAFLQLPQLESPTVPQSTSLSCNSVIPYGYDGNTNGSTLQSSSLTQEERIQHCHQQSLKSLHDSIDQAVDQVTDWRVLDKFVASQLSHDQDASKENSYSSNAAVLHVAQQITIQGNESRRPEEYASTSTSSCQIDLWK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00216 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 272 - -
Bach10g00216 352 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Bach10g00216 352 FunFam NAC domain-containing protein 16 160 - -
Bach10g00216 352 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Bach10g00216 352 MobiDBLite consensus disorder prediction 328 352 - -
Bach10g00216 352 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Bach10g00216 352 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00216 Bach-Chr10 1505536 1506981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00216 1 352 NAC Transcription Factor Family AT1G12260 56.545 1.21e-139 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach10g00216 NAM 5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00216 - - tcc:18606319 608.601