Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00214 ATGGCCGACGAAGCCAAAGCCAAAGGCAACGCCGCTTTCTCTTCGGGCGATTTCGCCGGTGCGATCCGTCACTTCTCCGATGCTATTGCTTTATCCCCAGAAAACCATGTACTCTATTCGAATCGATCTGCAGCTTACGCTTCTCTTCAGAAATACAGTGAAGCGTTGGATGACGCCAAGAAAACCGTCGCGTTGAAGCCTGATTGGTCCAAGGGTTACAGTCGTTTGGGTGCTGCTCAACTTGGTCTGGGCCAACACGATGATGCTGTTGCTGCTTACAGTAAAGGGCTTGAGATCGATCCTAATAATGGAGCACTAAAATCCGGCTTAGCTGATGCTCAGTCGGCGGCTTCTAGGCACCGTGCGCCGCTGAATAATCCTTTCGGAGATGCTTTTTCTGGGCCTGAGATGTGGGCAAAGCTCACTGCTGACCCGACGACTAGAATTTTTCTTCAACAACCAGATTTCGTGAAAATGATGCAAGATATTCAGAAAAATCCCAATAATTTAAACTCGCACTTGAAGGATCAAAGAGTCATGCAAGCCCTTGGGGTTTTGCTTAACATTAAGATGCGGGCCCCAACCGAGGACACAGATATGCCGGAGTCCTCACCTTCTCCCCCGCCACAGGAGAGGAAGAGGGCAGCAGAAGCTGAGCCTGCGAAGGAAGAGAACCATCCCGAGCCCGAGCCGGTTCCTATGGAACTGACAGAGGAGAGGGAAGCAAAGGAAAAGAAGGCCAAGGCTCAGAAGGAGAAGGAAGCAGGCAATGCTGCCTACAAGAAGAAGGATTTTGAAACAGCTATTCAGCATTACTCGAAGGCTTTAGAGTTGGATGATGAGGATATATCGTATCTCACAAACCGCGCAGCTGTTTACTTGGAGATGGGAAAGAATGAGGAATGTACGAAGGACTGTGATAAGGCTGTTGAAAGGGGAAGAGAACTAAGATCCGACTTTAAGATGATTGCTAGAGCTTTAACGAGGAAGGGGACAGCGTTGGTCAAAATGGCAAAATGCTCCAAGGATTTTGAACCTGCAATTGAGGCTTTCCAAAAAGCACTTACAGAGCATCGCAACCCAGACACCCTGAAGAAATTGAACGATGCTGAGAAAGCTAAGAAAGAACTAGAACAACAAGAATACTTTGATCCAAAAATTGCTGATGAGGAACGAGAGAAAGGTAATGAATTCTTCAAGCAGCAAAAGTATCCTGAGGCCATAAAGCATTACACAGAGGCTATTAGAAGGAATCCTAAAGATCCTAAGGCATACAGTAACAGAGCTGCTTGCTACACAAAACTGGGCGCAATGCCTGAGGGGTTGAAAGATGCAGATAAATGCATTGAGCTTGATCCAACGTTCTCTAAGGGTTACACTAGAAGAGGTGCAATCCAGTTTTTCATGAAAGAATATGACAAGGCTCTGGAAACATATCAGGCGGGATTGAAACATGACCCAAACAACCAGGAGTTGCTTGATGGCATAAGGAGCTGCGTCGAACAAATAAATAAGGCCAGTCGTGGAGATTTAAGTCCTGATGAGTTGAAGGAGAGACAGGCCAAGGGAATGCAGGATCCAGAGATTCAGAACATTCTCCAAGACCCTGTAATGAGACAGGTATTGATCGACTTCCAGGAGAATCCCAAGGCTGCGCAGGAACACACAAAAAATCCTATGGTGATGAACAAGATCCAAAAGCTGATCAGTGCTGGAATTGTCCAAATCAAATAGAACTGTATGTAAAGTGGCAGTTCGTGCAAAGGAGTGGTGGAAAATTGAGTAGCTGTATTCACTTTGTTTTTCTGAATTCAAATGGTTTATGAATATGATCAAAACTTTTCCATTTTTAGCGCTTGACACTTCCTATAAATTGATTAGTATGCCGGTTATGATTGTACTTTCTGATACATTGCAGTTTTG 1923 0.4529 MADEAKAKGNAAFSSGDFAGAIRHFSDAIALSPENHVLYSNRSAAYASLQKYSEALDDAKKTVALKPDWSKGYSRLGAAQLGLGQHDDAVAAYSKGLEIDPNNGALKSGLADAQSAASRHRAPLNNPFGDAFSGPEMWAKLTADPTTRIFLQQPDFVKMMQDIQKNPNNLNSHLKDQRVMQALGVLLNIKMRAPTEDTDMPESSPSPPPQERKRAAEAEPAKEENHPEPEPVPMELTEEREAKEKKAKAQKEKEAGNAAYKKKDFETAIQHYSKALELDDEDISYLTNRAAVYLEMGKNEECTKDCDKAVERGRELRSDFKMIARALTRKGTALVKMAKCSKDFEPAIEAFQKALTEHRNPDTLKKLNDAEKAKKELEQQEYFDPKIADEEREKGNEFFKQQKYPEAIKHYTEAIRRNPKDPKAYSNRAACYTKLGAMPEGLKDADKCIELDPTFSKGYTRRGAIQFFMKEYDKALETYQAGLKHDPNNQELLDGIRSCVEQINKASRGDLSPDELKERQAKGMQDPEIQNILQDPVMRQVLIDFQENPKAAQEHTKNPMVMNKIQKLISAGIVQIK 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00214 577 Coils Coil 234 259 - -
Bach10g00214 577 FunFam Stress-induced phosphoprotein 1 1 116 - -
Bach10g00214 577 FunFam Stress-induced phosphoprotein 1 246 380 - -
Bach10g00214 577 ProSiteProfiles TPR repeat profile. 456 489 IPR019734 GO:0005515
Bach10g00214 577 Pfam STI1 domain 518 569 IPR041243 -
Bach10g00214 577 Pfam STI1 domain 135 188 IPR041243 -
Bach10g00214 577 Gene3D Tetratricopeptide repeat domain 1 115 IPR011990 GO:0005515
Bach10g00214 577 MobiDBLite consensus disorder prediction 192 257 - -
Bach10g00214 577 Pfam Tetratricopeptide repeat 457 489 IPR001440 GO:0005515
Bach10g00214 577 Pfam Tetratricopeptide repeat 71 103 IPR001440 GO:0005515
Bach10g00214 577 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Bach10g00214 577 FunFam hsp70-Hsp90 organizing protein 3-like 387 501 - -
Bach10g00214 577 Gene3D Tetratricopeptide repeat domain 246 382 IPR011990 GO:0005515
Bach10g00214 577 Pfam Tetratricopeptide repeat 7 67 - -
Bach10g00214 577 SUPERFAMILY TPR-like 8 496 IPR011990 GO:0005515
Bach10g00214 577 SMART tpr_5 249 282 IPR019734 GO:0005515
Bach10g00214 577 SMART tpr_5 324 361 IPR019734 GO:0005515
Bach10g00214 577 SMART tpr_5 456 489 IPR019734 GO:0005515
Bach10g00214 577 SMART tpr_5 70 103 IPR019734 GO:0005515
Bach10g00214 577 SMART tpr_5 388 421 IPR019734 GO:0005515
Bach10g00214 577 SMART tpr_5 283 316 IPR019734 GO:0005515
Bach10g00214 577 SMART tpr_5 36 69 IPR019734 GO:0005515
Bach10g00214 577 SMART tpr_5 2 35 IPR019734 GO:0005515
Bach10g00214 577 SMART tpr_5 422 455 IPR019734 GO:0005515
Bach10g00214 577 Gene3D - 125 192 - -
Bach10g00214 577 ProSiteProfiles TPR repeat profile. 422 455 IPR019734 GO:0005515
Bach10g00214 577 Coils Coil 360 380 - -
Bach10g00214 577 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Bach10g00214 577 ProSiteProfiles TPR repeat region circular profile. 70 103 - -
Bach10g00214 577 Gene3D - 508 577 - -
Bach10g00214 577 FunFam Putative stress-induced-phosphoprotein 1 124 192 - -
Bach10g00214 577 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Bach10g00214 577 SMART CBM 134 173 IPR006636 -
Bach10g00214 577 SMART CBM 526 565 IPR006636 -
Bach10g00214 577 FunFam Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing) 509 577 - -
Bach10g00214 577 MobiDBLite consensus disorder prediction 212 257 - -
Bach10g00214 577 Pfam TPR repeat 395 436 - -
Bach10g00214 577 Pfam TPR repeat 256 297 - -
Bach10g00214 577 PANTHER TPR REPEAT CONTAINING PROTEIN 2 549 - -
Bach10g00214 577 ProSiteProfiles TPR repeat profile. 249 282 IPR019734 GO:0005515
Bach10g00214 577 ProSiteProfiles TPR repeat profile. 388 421 IPR019734 GO:0005515
Bach10g00214 577 Gene3D Tetratricopeptide repeat domain 387 507 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00214 Bach-Chr10 1487164 1490171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00214 1 99 U-box Gene Family AT3G07370 27.273 1.15e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00214 K09553 - qsa:O6P43_034125 939.488