Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00213 GTATGTGTTAGGGCTATGGGGAGGCAACCCTGCTGTGACAAGCTTGGGGTGAAGAAAGGTCCATGGACTGCTGAGGAAGACAAGAAACTCATAAACTTCATTCTCACTAATGGTCAGTGCTGTTGGCGAGCTGTGCCTAAGCTTGCTGGCCTCCGCCGCTGTGGCAAGAGTTGCCGCCTTCGTTGGACTAATTATCTTCGCCCTGACTTAAAGAGAGGCCTCCTCACAGAAACAGAAGAGCAACTCGTTATTGATCTCCATGCCCGTCTTGGCAACAGGTGGTCCAAGATTGCTGCTAGATTACCAGGAAGGACAGACAATGAGATAAAAAATCATTGGAACACCCACATCAAGAAGAAGCTAATAAAGATGGGTATAGATCCCGTTACTCATGAACCCCTCAATAAACAAGAAACGTCATCCTCTGCTGAGCATTTGCCACAATCTGGTAGTAAAAATAATCAGGTTAAGGAAACTGAGGGGGTTGTCAACTCAGAGGAGAATTCAAGCTCATCCCCAGCTGAAAACTCTTCTGGGGATGAATCCCTTTTGTTAGATAGCATTTGCAGTGATGACACACTAATGAACAGCTTGTGGTTGGATGAAACTCCTCTGGTGGAAGCATTATGGGACAGCACACCTAAAGTAAAGAACAATAACAATGACATGGGTGGCTTGCCGTCTTGGGAGGATACTTGTGGTTGGCTATTGGACTGTCAAGACTTTGGTATTCATGATTTTGGTTTTAATTATTTCAACGAGATTGAATCAAATGCAATGCAAACTCTAGGAATGGAGGAAAAGGGGCATTAG 813 0.449 MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTETEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLIKMGIDPVTHEPLNKQETSSSAEHLPQSGSKNNQVKETEGVVNSEENSSSSPAENSSGDESLLLDSICSDDTLMNSLWLDETPLVEALWDSTPKVKNNNNDMGGLPSWEDTCGWLLDCQDFGIHDFGFNYFNEIESNAMQTLGMEEKGH 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00213 265 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 178 - -
Bach10g00213 265 MobiDBLite consensus disorder prediction 126 177 - -
Bach10g00213 265 Gene3D - 12 67 - -
Bach10g00213 265 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach10g00213 265 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach10g00213 265 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Bach10g00213 265 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach10g00213 265 CDD SANT 16 61 IPR001005 -
Bach10g00213 265 Gene3D - 70 154 - -
Bach10g00213 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach10g00213 265 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bach10g00213 265 SMART sant 13 63 IPR001005 -
Bach10g00213 265 SMART sant 66 114 IPR001005 -
Bach10g00213 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach10g00213 265 FunFam MYB transcription factor 70 148 - -
Bach10g00213 265 FunFam MYB transcription factor 11 67 - -
Bach10g00213 265 CDD SANT 71 112 IPR001005 -
Bach10g00213 265 MobiDBLite consensus disorder prediction 128 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00213 Bach-Chr10 1475383 1476870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00213 1 244 MYB Transcription Factor Family AT4G22680 60.902 4.07e-101 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach10g00213 Myb_DNA-binding 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00213 K09422 - gmx:100786965 463.381