Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00197 ATGAGTAGTGGGGTTACGGTGGTGGGTTCAGATGCTCCGTCGGACTACCATGTAGCTCCGAGGACTGAAAACCCAGCTCCGGCTGGTGGATCACCAACACCAACACCAACGCCGGTGCCGGCGACACAAGTGAGCGTTGCACCACCACAGCCAGCTCCGTTGACGGCGGAGCTGGTGGCCACAACCATGCCGTTAAAGAAAAAGAGGGGTCGACCCAGAAAGTATGGACCAGACGGGTCAGTGACCAAGGTGCTATCTCCTAAGCCAATATCTTGTTCAGCTCCACCGCCAGTAATCGATTTCTCGGTGGGGAAGCGGGGAAAAGTGCGGCCAGCTAGCTCGGTGACCAAAGCCAAATTCGTGGTCGAGAATTTAGGTGCATGGGTCGCATGCTCTGTCGGTGCTAATTTTACTCCCCATATCATCACTGTTAATTCAGGGGAGGATGTCACTATGAAGGTAATATCGTTTTCCCAGCAAAGTCCTCGAGCTATATGCATTCTTTCTGCAAATGGTGTGATATCCAGTGTCACACTTCGTCAGCCTGATTCTTCTGGAGGAACATTGACGTACGAGGGACGGTTCGAAATTCTGTCCTTATCTGGTTCATTCATGCCAAATGAAAGTGGAGGGACGCGAAGCAGATCTGGTGGAATGAGTGTTTCTTTAGCAAGTCCAGATGGGCGCGTTGTAGGTGGTGGAGTAGCTGGTCTATTAGTAGCTGCAAGTCCAGTGCAAGTAGTGGTAGGGAGTTTTCTGGCAGGAAACCAACATGAGCAGAAGATAAAGAAACACAAACATGAAATAACAATGAGTGTCATACCAACTGCGGCTGTTCCTATTTCTAGTGCTGAACCAATACATATTCTATCATCTTCGTCTTCCTTCCGTGGAGATAATTGGTCTGCCATGCCAGCACCAGCAGATACAAGGAATCAGCCAACTGATATTAATGTGTCATTGTCACAACCTGGAGGGTGA 981 0.4954 MSSGVTVVGSDAPSDYHVAPRTENPAPAGGSPTPTPTPVPATQVSVAPPQPAPLTAELVATTMPLKKKRGRPRKYGPDGSVTKVLSPKPISCSAPPPVIDFSVGKRGKVRPASSVTKAKFVVENLGAWVACSVGANFTPHIITVNSGEDVTMKVISFSQQSPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKIKKHKHEITMSVIPTAAVPISSAEPIHILSSSSSFRGDNWSAMPAPADTRNQPTDINVSLSQPGG 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00197 326 CDD DUF296 138 229 IPR005175 -
Bach10g00197 326 Gene3D - 139 273 - -
Bach10g00197 326 MobiDBLite consensus disorder prediction 298 326 - -
Bach10g00197 326 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 299 IPR039605 GO:0003680
Bach10g00197 326 MobiDBLite consensus disorder prediction 27 47 - -
Bach10g00197 326 MobiDBLite consensus disorder prediction 1 82 - -
Bach10g00197 326 FunFam AT-hook motif nuclear-localized protein 1-like 139 270 - -
Bach10g00197 326 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 255 - -
Bach10g00197 326 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 252 IPR005175 -
Bach10g00197 326 ProSiteProfiles PPC domain profile profile. 134 277 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00197 Bach-Chr10 1370868 1373877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00197 4 322 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 62.647 1.84e-125 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00197 - - qsa:O6P43_024280 442.58