Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00182 ATGGCTTCCACGCTTCAATTTTGTGGCTTGAACACCTTGCTGTTTATCACAATCATGGCTATACCAACAACAGCTGTAGGAATATTTCGACCCAGCCGATGGGCTCTTGCCCGTGCCACATTTTATGGTGATGAGACTGCTTCTGCAACCATGGGAGGAGCATGTGGGTATGGAAACTTGTTTCTGAATGGTTACGGGACGGATACGGTGGCTTTGAGCTCGACATTATTCAACAATGGGTATTCTTGCGGCACCTGTTACCAGATAAAATGTTACCAATCGAGTGCATGCAATGGCAACGTGCCCTTCATCACGGTGACCGCTACCAACCTTTGCCCTCCTAATTGGGCCCAACCCTCTGATAATGGCGGGTGGTGCAACCCACCACGTGCCCATTTTGACATGTCCAAACCAGCCTTCATGAAATTTGCCCAGTGGAAAGCTGGCATCGTCCCTGTTTTGTTCCGCAGAGTACCATGCCAGAGGAGTGGAGGGCTTCGATTCTCTTTCCAAGGAAATGGGTACTGGTTACTGGTGTACGTGATGAATGTGGGAGGTGGAGGAGATATTGCAGGGATGTGGGTGAAGGGAAGCAGAACAGGATGGATTAGCATGAGCCACAACTGGGGAGCTTCATACCAGGCATTTGCAACTCTTGGTGGCCAAGCTCTTTCTTTCAAGATAACTTCATACACAACTAAGCAGACTATTGTAGCATGGAATGTCGCTCCTTCCAATTGGGCCGTAGGATTAACTTATTCCTCCCAAGTCAACTTCCACTGA 783 0.4879 MASTLQFCGLNTLLFITIMAIPTTAVGIFRPSRWALARATFYGDETASATMGGACGYGNLFLNGYGTDTVALSSTLFNNGYSCGTCYQIKCYQSSACNGNVPFITVTATNLCPPNWAQPSDNGGWCNPPRAHFDMSKPAFMKFAQWKAGIVPVLFRRVPCQRSGGLRFSFQGNGYWLLVYVMNVGGGGDIAGMWVKGSRTGWISMSHNWGASYQAFATLGGQALSFKITSYTTKQTIVAWNVAPSNWAVGLTYSSQVNFH 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00182 260 Gene3D - 166 260 IPR036749 -
Bach10g00182 260 SUPERFAMILY PHL pollen allergen 162 255 IPR036749 -
Bach10g00182 260 PRINTS Expansin signature 164 176 IPR002963 GO:0009664
Bach10g00182 260 PRINTS Expansin signature 104 114 IPR002963 GO:0009664
Bach10g00182 260 PRINTS Expansin signature 241 257 IPR002963 GO:0009664
Bach10g00182 260 PRINTS Expansin signature 140 153 IPR002963 GO:0009664
Bach10g00182 260 PRINTS Expansin signature 176 197 IPR002963 GO:0009664
Bach10g00182 260 PRINTS Expansin signature 123 140 IPR002963 GO:0009664
Bach10g00182 260 PRINTS Expansin signature 64 78 IPR002963 GO:0009664
Bach10g00182 260 Pfam Lytic transglycolase 69 154 IPR009009 -
Bach10g00182 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 175 255 IPR007117 -
Bach10g00182 260 PANTHER EXPANSIN-A15 12 255 IPR002963 GO:0009664
Bach10g00182 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 52 165 IPR007112 -
Bach10g00182 260 Pfam Expansin C-terminal domain 167 244 IPR007117 -
Bach10g00182 260 Gene3D - 22 161 IPR036908 -
Bach10g00182 260 CDD DPBB_EXPA_N 33 160 - -
Bach10g00182 260 PRINTS Expansin/Lol pI family signature 51 69 IPR007118 GO:0005576
Bach10g00182 260 PRINTS Expansin/Lol pI family signature 202 216 IPR007118 GO:0005576
Bach10g00182 260 PRINTS Expansin/Lol pI family signature 73 91 IPR007118 GO:0005576
Bach10g00182 260 PRINTS Expansin/Lol pI family signature 241 255 IPR007118 GO:0005576
Bach10g00182 260 PRINTS Expansin/Lol pI family signature 33 48 IPR007118 GO:0005576
Bach10g00182 260 PRINTS Expansin/Lol pI family signature 148 164 IPR007118 GO:0005576
Bach10g00182 260 SMART dpbb_1 69 155 IPR007112 -
Bach10g00182 260 SUPERFAMILY Barwin-like endoglucanases 33 183 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00182 Bach-Chr10 1274081 1275257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00182 1 260 Expansin Gene Family AT1G12560 63.462 4.62e-122 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00182 - - gmx:100807807 465.692