Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00176 ATGGCTCATTCTGTTTATGGTGAAACTCTATCTTTTGGAGGCTCAAGCCATGGACAGGGTCAACAAGTTTTGCCCTTTCCTACGACTACGAGTTCCTCAAGAATTTTGCTTTTACATGGCAACTTAGAGATACATGTCAAAGAGGCCAAAAGCCTTCCTAACATGGATATGTTTCATAAGACTATGAGTGATATGTTTTCCATGTTACCTGGAAAACTTGGCAAAAGTGTTGGAGGACATATGTCCCATAAGCTAACCAGTGACCCATATGTAACTGTATCAGTATCAGGTGCTGTAATTGCGAGGACATTTGTAATCAGAAACGATGAGAACCCTGTTTGGATGCAGCATTTTAATGTTCCTGTTGCACATTATGCTGCGGAAGTCCACTTTGTTGTAAAAGATGACGATGTTGTAGGCTCACAGCTTATCGGTGCCGTGGGAATACCAGTGGAACAGTTATATACAGGCACAAAAGTGGAGGGAACTTTTCCCATCCTTACTGCTAATGGGAAGCCTTGTAAGGATGGAGCAGTTTTGAGTTTATCCATTCAATATACGCCATTTGATAAACTGGCTCTTCACCATCATGGAGTAGGCGGAGGTCCTGAATATGAAGGGGTCACTGGTACGTACTTTCCCCTTCGGAAAGGAGGCAATGTTAAACTTTATCAAGATGCTCATGCTCCCCAAGGTTGCCTCGCCAATTTGAAGATTGATGGTGATTTAAATTATGAGCATGGCAACTGTTGGCATGACATCTTTGATGCTATAAGTCAGGCCCGAAGATTAATATACATTGTCGGGTGGTCTGTGTACTACAATGTTACACTGATTCGCGATGGCAAGGATGAAAAGTCTTGCACCTTAGGTGATCTTCTCAAAATTAAATCCCAGGAAGGTGTGAGAGTGCTGCTTCTTATATGGGATGATCCTACTTCTAGAAGCATGTTGGGATATAAAACGGACGGAATTATGAACACTCGTGATGAGGACACTCGTCGTTTTTTCAAGCACTCTTCCGTACGAGTCATACTTTGCCCACGAACTGGTGGAAAAGGACATAGTTGGATCAAGAAGCAGGAAGCTGGAACAATCTACACCCATCATCAGAAAACAGTCATTGTGGATTCGGATGCAGGTCAAAATAGAAGAAAGATTATAGCTTTTGTTGGAGGTCTTGATTTATGCGCGGGGCGATATGATACACCACAACATTCTCTCTTTAGGACTTTGCGTACAACCCACAAAGAGGACTATCATAATCCTAACTTCACAGGGCCAGTGGATGGTTGTCCAAGACAGCCATGGCATGATTTGCACTCCCAAATTGATGGTCCAGCTGCATATGACATCCTTACCAATTTTGAGGAACGTTGGTTAAGGGCATCAAAGGTATCTGGATTTCAGAAGATGAAAAGTTCCTATGATGATTCATTGCTGAATATTAGTAGAATTCCTGACATCATTGGTATTGCTGATCTTCCTTCCCTAAATAAAGATAACCCAGAGAATTGGGATGTCCAGATCTTCCGTTCGATTGACTCCAATTCTGTCAAAGGATTTCCGAAGGAACCAAGAGATGCTATAAAAAGGAACTTGGTTTGTGGGAAGAATGTACTGATAGATATGAGTATTCATGCTGCATATGTAAAGGCAATCCGATCTGCACAGAAGTTCATATATATTGAGAACCAATACTTTCTCGGTTCGTCGTATAAATGGGATTCTTACAAAAACTTGGGTGCAAACAACTTAATTCCGATGGAAATTGCTCTTAAAATAGCCAACAAAATCAAACAAAATGAGAGGTTCGCTGTGTACATTATCATTCCAATGTGGCCTGAAGGTGTACCCACAAGTACAGCAACTCAACGGATTCTCTTTTGGCAGTTCAAAACAATGGAAATGATGTACGAAACAATTTACAAGGCTCTTGAGGAGGCTGGACTTGACAATCAGTATGAACCACAAGACTACTTGAATTTCTTTTGCCTTGGCAATCGCGAGGCACCAGATAATGAAAATAATTTGAATGCTGTTCCTCCTACTGGAGCAAATACTCCTCAGGTACTTACTCAAAAGAACCGGCGGTTCATGATTTACGTTCATTCAAAAGGAATGATAGTAGATGACGAATACGTTATACTGGGATCTGCTAACATTAACCAGCGATCCATGGAAGGCACTAGAGACACAGAGATAGCAATGGGTGCATATCAGCCGCATCATACCTGGGCAATCAAGCACTCTAAACCTTTTTTAAAATTAAATTTCATTGCTAAGTTGGAGAATATTTTTCAGGTGTATGGATATAGAATGTCACTATGGGATGAACACACGGGAGCTGTGGAAGAATGTTTCAAGCGACCAGAGAGCCTTGAATGCGTGAGACGGATAAGGTCCTTGAGTGAGCTGAATTGGAAACAGTACGCAGCAAATGATCAAGTTACTGAAATGAAAGGCCATCTATTAAAGTACCCACTTGAAGTTGATTCCAAGGGCAAAGTGAAGTCTCTTGCTGGTCATGAGACATTCCCGGATGTTGGAGGCAACATTAAAGGCACTTTTACAGGCATTCAAGAAAATCTCACCATCTGA 2601 0.4156 MAHSVYGETLSFGGSSHGQGQQVLPFPTTTSSSRILLLHGNLEIHVKEAKSLPNMDMFHKTMSDMFSMLPGKLGKSVGGHMSHKLTSDPYVTVSVSGAVIARTFVIRNDENPVWMQHFNVPVAHYAAEVHFVVKDDDVVGSQLIGAVGIPVEQLYTGTKVEGTFPILTANGKPCKDGAVLSLSIQYTPFDKLALHHHGVGGGPEYEGVTGTYFPLRKGGNVKLYQDAHAPQGCLANLKIDGDLNYEHGNCWHDIFDAISQARRLIYIVGWSVYYNVTLIRDGKDEKSCTLGDLLKIKSQEGVRVLLLIWDDPTSRSMLGYKTDGIMNTRDEDTRRFFKHSSVRVILCPRTGGKGHSWIKKQEAGTIYTHHQKTVIVDSDAGQNRRKIIAFVGGLDLCAGRYDTPQHSLFRTLRTTHKEDYHNPNFTGPVDGCPRQPWHDLHSQIDGPAAYDILTNFEERWLRASKVSGFQKMKSSYDDSLLNISRIPDIIGIADLPSLNKDNPENWDVQIFRSIDSNSVKGFPKEPRDAIKRNLVCGKNVLIDMSIHAAYVKAIRSAQKFIYIENQYFLGSSYKWDSYKNLGANNLIPMEIALKIANKIKQNERFAVYIIIPMWPEGVPTSTATQRILFWQFKTMEMMYETIYKALEEAGLDNQYEPQDYLNFFCLGNREAPDNENNLNAVPPTGANTPQVLTQKNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHHTWAIKHSKPFLKLNFIAKLENIFQVYGYRMSLWDEHTGAVEECFKRPESLECVRRIRSLSELNWKQYAANDQVTEMKGHLLKYPLEVDSKGKVKSLAGHETFPDVGGNIKGTFTGIQENLTI 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00176 866 Pfam Phospholipase D C terminal 785 856 IPR024632 -
Bach10g00176 866 Gene3D Endonuclease Chain A 236 482 - -
Bach10g00176 866 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Bach10g00176 866 SUPERFAMILY Phospholipase D/nuclease 212 466 - -
Bach10g00176 866 Pfam Phospholipase D Active site motif 366 400 IPR001736 GO:0003824
Bach10g00176 866 FunFam Phospholipase D delta 241 479 - -
Bach10g00176 866 PIRSF PLD_plant 28 866 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bach10g00176 866 Gene3D C2 domain 35 176 IPR035892 -
Bach10g00176 866 ProSiteProfiles C2 domain profile. 23 164 IPR000008 -
Bach10g00176 866 Pfam C2 domain 40 166 IPR000008 -
Bach10g00176 866 CDD C2_plant_PLD 36 187 - -
Bach10g00176 866 SUPERFAMILY Phospholipase D/nuclease 546 795 - -
Bach10g00176 866 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 699 726 IPR001736 GO:0003824
Bach10g00176 866 SMART C2_3c 41 163 IPR000008 -
Bach10g00176 866 Gene3D Endonuclease Chain A 512 751 - -
Bach10g00176 866 PANTHER PHOSPHOLIPASE D 32 855 IPR015679 -
Bach10g00176 866 SMART pld_4 699 726 IPR001736 GO:0003824
Bach10g00176 866 SMART pld_4 365 400 IPR001736 GO:0003824
Bach10g00176 866 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
Bach10g00176 866 Pfam PLD-like domain 551 735 IPR025202 -
Bach10g00176 866 FunFam Phospholipase D 513 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00176 Bach-Chr10 1234306 1238804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00176 32 866 Phospholipase D Gene Family (Wang group) AT2G42010 69.338 0.0 1278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00176 K01115 - gmx:100786241 1425.22