Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00174 ATGACGTCGTATCGGAAGCAGGATTTAGATCAAGACGACGATGAAGGAACGTCCGACGTTAGCACCAGTGCCGGCGAGCCGGACCGTGACTCTGCTGTTGACAACAGCAGGCACGATAACGTAGTCCTGAAAGAGAGAATGTTGGAGGATACCACGCCTTTCCAAGGGTTGCCGTTGAAGGAGGAGCCCATTGTTGCTGATCCTCCATCAGACCCGGACCAAATGACCCCCACAATCTCAAACTCAAAATTTCCAATTGGGGTTGTTCCAGTGGCGATGCATATGCAGATGTCAATGCCCATGCCGATGCCGGTCACGGCAACTAGACGCTCCTCTACCAAGGACCGCCACACCAAAGTAGAAGGCCGTGGGCGCAGGATCCGAATACCCGCCACGTGCGCAGCTCGGATCTTTCAGCTGACTCGGGAGTTAGGCCATAAATCTGACGGCGAAACCATCCGGTGGCTGCTCGAACACGCCGAGCAGGCCATAATCGAGGCCACCGGAACCGGCACCGTTCCGGCTATCGCTGTTTCTGTTGGAGGAACTTTGAAAATTCCCACAACGTCCAACAGTACCAATAATCAGCCCGATGCTGAACCTATCAAGAAGAGGAAACGGGCGTCGAATAGCGAGTTCGTTGACGTAAGTGAAGTCGTTTCACAGTCCTCCATTTTGGCCCCGGTTCAACCCGCAGCGCCAGCAGCACAAGGTCTTGTGCCTGTGTGGGCAGTGGGTAACACCAACATGATGGTACCGGCAAACGCTTTCTGGATGATTCCGCAGGTGACGGATACCCCGGTGGGTGTAGTCAGTGGCTCATCGAACCATCAAGCGCAAATATGGGCTTTATCTCCGACTATGACCCCCTTATGCAACATGTCGGTGAGACCCATGTCGTCATTCTTGCCAGCAACAAATATCCCGAGCGGCGTACAAATCCTGCAGGTGGGTTGTCACAATACGTCTAATTCAGCGGTGACTACGAGTATGGTGGGGCCAAAGGTGGTGAAGAAGTCGACCATGGTACCCAGTGTTAGTTCTAGCGGGACAGGTGGTGCTAATAGTAGTAATGGTAGCAAGGCTCAGATGTTACGGGATTTTTCAATGGAGATTTACGATAAGCAAGAGGTGCAGCTCATGGGTCGGTCTGGGAATCAACGAGGACAAGCTTCCAATCAATGA 1185 0.53 MTSYRKQDLDQDDDEGTSDVSTSAGEPDRDSAVDNSRHDNVVLKERMLEDTTPFQGLPLKEEPIVADPPSDPDQMTPTISNSKFPIGVVPVAMHMQMSMPMPMPVTATRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTTSNSTNNQPDAEPIKKRKRASNSEFVDVSEVVSQSSILAPVQPAAPAAQGLVPVWAVGNTNMMVPANAFWMIPQVTDTPVGVVSGSSNHQAQIWALSPTMTPLCNMSVRPMSSFLPATNIPSGVQILQVGCHNTSNSAVTTSMVGPKVVKKSTMVPSVSSSGTGGANSSNGSKAQMLRDFSMEIYDKQEVQLMGRSGNQRGQASNQ 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00174 394 MobiDBLite consensus disorder prediction 188 208 - -
Bach10g00174 394 MobiDBLite consensus disorder prediction 342 364 - -
Bach10g00174 394 Pfam TCP family transcription factor 112 198 IPR017887 -
Bach10g00174 394 ProSiteProfiles TCP domain profile. 113 167 IPR017887 -
Bach10g00174 394 MobiDBLite consensus disorder prediction 1 82 - -
Bach10g00174 394 MobiDBLite consensus disorder prediction 30 46 - -
Bach10g00174 394 MobiDBLite consensus disorder prediction 342 368 - -
Bach10g00174 394 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 107 373 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00174 Bach-Chr10 1227076 1228260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00174 109 387 TCP Transcription Factor Family AT2G45680 46.203 3.22e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bach10g00174 TCP 1.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00174 - - pcin:129284605 476.478