Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00166 ATGGACATTTTCAGACAATCATTTGACGAATCGAACTACGGATATGGATTGATGAGTCGTAGTAAGTCAGAGGCGTCTTCCTCGTCGGAAACAAGCTCCTCTAACCGCCCAATTACTCATCACTATTCTGACGAGGAAGAATCCGTGATTCTAGCATCATCGGTGCCAAAGAAGCGAGCAGGTCGCAGAATATTCAAGGAGACCAGACACCCCGTTTACCGAGGAGTGCGTCGGAGGAACAATAACAAGTGGGTTTGCGAGTTGCGTGTCCCCAATGACAAAGCAAGGATTTGGCTTGGAACCTACCCAACGCCTGAGATGGCTGCTCGAGCCCATGACGTCGCAGCATTGGCACTTCGGGGGAAGTCGGCTTGCCTCAATTTCCCTGACTCGGCTTGGCGGCTGCCTTTGCCGGCCTCAAGCAATGCGGACGAGATTAGGAGAGTGGCCGCTGAGGCTGCTCACCAATTTGGGCATGTCCACCAGCACTATGAACAGCAGATCAACATAAACGATGCGACTGTCACTGATGATCGAATTTGTAGCAATAGCCTTGGGGTTATGGGAGATGCGGGAACGCCTACGCAACAAGAGGGTGTTCCTGATGATTTTTATCATTTGCTTATGACTATGGCAGATGAACCTTTGAGATCACCACCTCCTGTCGTAAGAGATGGTAGGGACTGGAATGACGTGGACTTTGATGCTGAGGTGTCATTGTGGAGCTTCTCTGTTTGA 738 0.5041 MDIFRQSFDESNYGYGLMSRSKSEASSSSETSSSNRPITHHYSDEEESVILASSVPKKRAGRRIFKETRHPVYRGVRRRNNNKWVCELRVPNDKARIWLGTYPTPEMAARAHDVAALALRGKSACLNFPDSAWRLPLPASSNADEIRRVAAEAAHQFGHVHQHYEQQININDATVTDDRICSNSLGVMGDAGTPTQQEGVPDDFYHLLMTMADEPLRSPPPVVRDGRDWNDVDFDAEVSLWSFSV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00166 245 Gene3D AP2/ERF domain 72 130 IPR036955 GO:0003700|GO:0006355
Bach10g00166 245 MobiDBLite consensus disorder prediction 19 38 - -
Bach10g00166 245 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Bach10g00166 245 PRINTS Ethylene responsive element binding protein signature 95 111 IPR001471 GO:0003700|GO:0006355
Bach10g00166 245 ProSiteProfiles AP2/ERF domain profile. 72 129 IPR001471 GO:0003700|GO:0006355
Bach10g00166 245 FunFam Ethylene-responsive transcription factor 2 71 130 - -
Bach10g00166 245 SMART rav1_2 72 135 IPR001471 GO:0003700|GO:0006355
Bach10g00166 245 Pfam AP2 domain 71 121 IPR001471 GO:0003700|GO:0006355
Bach10g00166 245 MobiDBLite consensus disorder prediction 19 43 - -
Bach10g00166 245 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 22 243 IPR045277 GO:0003700
Bach10g00166 245 SUPERFAMILY DNA-binding domain 72 131 IPR016177 GO:0003677
Bach10g00166 245 CDD AP2 73 131 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00166 Bach-Chr10 1155477 1156214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00166 45 243 AP2-EREBP Transcription Factor Family AT1G63030 50.000 6.29e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach10g00166 AP2 2.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00166 - - pvu:PHAVU_003G212800g 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00166 10 1155477 1156214 Bach10g00166 10 1155477 1156214 ECH