Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00156 ATGACTAGGTCACCGAATTGTTCATCTGAGGACATCGTCGATACAACGCCGTTCATTGGGAATTCAGGTGGGTCTTCCGATGAGTTCAACTCTGGCCGTCGATTTGTCCGGAGACAGAGCCTGCGCCAAGCCGCACGGTTCCTTCGTCAGGCAAGTAATCGTAGGATGATGCGCGAGCCGTCGATGCTGGTCAGAGAGACTGCAGCTGAGCAATTAGAAGAAAGACAGAGCGATTGGGCTTATTCTAAGCCCGTGGTGATTCTTGATATTATTTGGAACTTCGCCTTTGTTGTCGTTGCCGCCACCGTGTTGGTTTTGAGCCGACGTGAATCGCCGAGCATGCCTATGAGGTGGTGGATTGTGGGATATGCTCTACAATGCATCATTCACATGGTCTGTGTTTGCGTTGAGTATAAGAGACGGAGGCGGTACCAGCACGTCCAATTTTCGCCATCCTTGAATGCAGTGCAGGGAAGGATCGGCAGCAGTGGAAATTTGAATTCGGTTTCAAGGGAAGGTTCTGGGCAGTATGTGTCGTTGGCCCAATTCGATGAGGAGGGTACAAGTTTTGCCAAGCATCTGGAATCTGCAAATACAATGTTTTCATTTATTTGGTGGATTATTGGATTTTACTGGGTTTCGGCTGGTGGTCAGGCGTTAGCCAAAGATTCTCTTCAGCTTTACTGGCTTTGTATAATTTTCCTGGGTTTTGACGTTTTCTTTGTCGTTTTCTGTGTTGCTCTGGCTTGCATCATTGGCATTGCTGTTTGCTGTTGTCTTCCATGTATCATTGCGCTTTTATATGCTGTCGCAGACCAGGAAGGGGCGTCAAAAGAAGATATCGAGCAGTTGTCAAAGTTCAAATTTCGAAGAATTGATAATGATGAGAAACTTGCCGGCAACAACACCCAGGGACCTGTTGGAGGAATAATGACTGAATGTGGAGTTGATTCGCCTATAGAACACATTCTTTCTGATGAGGATGCGGAATGTTGCATCTGCCTATCTGCTTATGAAGATGGAGTAGAACTTAGACAACTTCCATGTGGTCACCATTTTCACTGTGCCTGCGTGGATAAGTGGCTCTATATTAATGCTACTTGTCCCCTCTGCAAGTATAACATCTTGAAAAGTAGCAGTCTCGATCAAGAAGAAGTGTAGAAAAGATCAAAAGAATTTCCAGCAGCCATGTTGTGGAACCTGAATATTCTTTTTTCAGAGTGTAGTATAAGGATCAACATGTTAATAAACTTTATATAAATACGTTAAAGTTGTTGTTATTGCTTTATAAGCTTGCTATTTTGTAGTGCTAGTTTTTTTTTTTATTTTTTATTGCATTTGTTAGAGGTGGCTGCTAACTGATTGTGTATAGCAGTGTTGTGCAGTGCATCAAGAATATAATCTGAAGATTAC 1413 0.4345 MTRSPNCSSEDIVDTTPFIGNSGGSSDEFNSGRRFVRRQSLRQAARFLRQASNRRMMREPSMLVRETAAEQLEERQSDWAYSKPVVILDIIWNFAFVVVAATVLVLSRRESPSMPMRWWIVGYALQCIIHMVCVCVEYKRRRRYQHVQFSPSLNAVQGRIGSSGNLNSVSREGSGQYVSLAQFDEEGTSFAKHLESANTMFSFIWWIIGFYWVSAGGQALAKDSLQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIDNDEKLAGNNTQGPVGGIMTECGVDSPIEHILSDEDAECCICLSAYEDGVELRQLPCGHHFHCACVDKWLYINATCPLCKYNILKSSSLDQEEV 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00156 386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 317 380 IPR013083 -
Bach10g00156 386 FunFam E3 ubiquitin-protein ligase At1g12760 317 382 - -
Bach10g00156 386 Pfam Ring finger domain 330 372 IPR001841 -
Bach10g00156 386 SMART ring_2 331 371 IPR001841 -
Bach10g00156 386 MobiDBLite consensus disorder prediction 1 29 - -
Bach10g00156 386 ProSiteProfiles Zinc finger RING-type profile. 331 372 IPR001841 -
Bach10g00156 386 MobiDBLite consensus disorder prediction 1 30 - -
Bach10g00156 386 SUPERFAMILY RING/U-box 321 378 - -
Bach10g00156 386 PANTHER TARGET OF ERK KINASE MPK-1 51 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00156 Bach-Chr10 1085194 1088118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00156 22 379 C3H Transcription Factor Family AT1G68070 48.468 1.74e-115 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00156 - - qsa:O6P43_034207 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00156 10 1085194 1088118 Bach4g00171 4 1136335 1140539 BWGD