Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00145 ATGTATTCATCTATCCTCTCAGAACGCCCTAGGACAATATCGAAGCTTCTCTGTACCTTCATCTTGGCGCGAAACATGGGCGGGGGTCCTCGCACTTTCCCCGGCGGCGTCAACAAGTGGAAATGGAAACGCATGCATGAGAAGCGAGCAAGAGATAAAGAGAGAAGGCTACTTGAACAAGAAAAGCAAATCTACCAGGCTCGAATTCGATCGCATATTCGGGCGGAACTTGCAGGAAAACCAGACCCTGGAAGCACCAGTCATGGCCCTTTGACCCCGGAGGAACACATAAAAACATTAGCGAATAGATTTATGAAGGAGGGAGATGAAGATCTCTGGAACACAAATGATGGTCCGTTAAAGTCTCCGCCTCCGTGTTTCAAAGAACTTCCAGGAACGAATCGATCAAGCAGACGCCCAGGTTCTACTGGATCGCTGGTGGATTTGAGGAAACTGATACCGGAAGGCCGTAACCTGGTTTCTAATAATGGGATCAGATATTTGACTAATACAAATGGTAATTGCGTACTTGCTAGGAATTACTCAGTGCAAAGTCGAAGAAAATTTGGGAGTTACGACAGTTCTTCGGCCGAGGATGTTTTCAGTTCTAGTCTGAAGGGAAATTCTGCAAGGTCCACCATTAGAAATTTAGTCAGTAATCCGAGAAACATGAGTAACACTAGTGTGGATGGTTACATAAATAATAAGAAAGTTACGACAAAAAGGCGGCAGAAATTTTGGAGGAATGGGAGTTATTCCAGTGAAAGTGAATCAGAGTGGGATGCAGAGGGCGAACCTGGGAACTATTCAAGGGGCTGCAGGTTGAATTTTGCGGGAGAAGAAATATCAGGAAATGGTGAGGATTTAAGAATTGGGAGGGATGTAAGGAAGATGGGTAGTAGTGCTTCTTTGGGGAAGTATGATGTCACGTCCAAGAGGAGGATGCTGCCAAAGTTATATGACGAGGTGAATGATCTTTCAGAGCAGGTTGAGTCGATCAGGGATCAACTTAGTGAGACGAAGTCGGCCCAGAATGAGGAGCAGAAAACTGAGGGAGAAATTATGCTTAGTCAGAGAAGATTTGATGAGTGCGGTATATCACCATTGACAGTAAAAGCGCTTTCTTTGGCTGGTTATATTCACATGACCTGGGTACAAGAGGCATCCCGTTCTGTTTGCCTTGAAGGCAAGGATGCTTTAGTTAAAGCTAAAACTGGCACTGGAAAAAGTGTGGCATTTTTGCTTCCTGCTATTGAAACAGTTCTGAAGGCTATGGATAGCAACACCAATCAACGGGTGCCTCCAATATTTGTTCTTATACTCTGCCCTACCAGAGAACTTGCTAGCCAAATTGCTGCTGAAGCAAAGGTTTTGCTGAAGTATCATGATGGAATTGGAGTGCAAACTCTAGTTGGAGGCACACGATTTAAAGTTGACCAAAACCGCCTTGAATCAGATCCAAGCCAGATAATTGTTGCTACTCCTGGTAGGTTGTTGGATCATATTGAGAATAAGTCTGGCATATCTGTGCGGTTGATGGGCTTGAAGATGCTTGTACTTGATGAAGCTGACTATTTACTGGACCTGGGATTTCGAAAGGATGTGGAAAAGATTGTTGATTGTTTGCCCCGTCAGAGGCAATCGTTGCTATTTTCTGCAACCATACCAAAGGAGGTTCGCCGTATATCTCAACTTGTTTTGAAGAGGGAACATGCATACATTGACACTGTGGGGATCGGCTGTGTGGAAACTCCAACTAAGATAAAGCAATCTTATCTTATTGCTCCACACGAATGTCATTTTCAAATTGTTCACCATATTTTGAAGGAGCATATCTTGCAAGCTCCTGATTATAAGGTTATTGTCTTCTGTGTAACTGGGATGGTGACATCATTTATGTATCAACTTCTCCGGGAAATGAAAATGAATGTTAGAGAGATGCATTCCCGAAAACCTCAAATCTATCGAACTCGTATATCAGATGAGTTCAGGGAATCCAAACAACTAATTCTTGTGTCATCGGATGTTTCAGCACGGGGGATGAATTATCCTGATGTTACCTTAGTCATTCAGGTGGGTATTCCATGTGACCGAGAACAATATATACACCGTCTTGGAAGAACAGGACGAGAAGGCAAAGAAGGGGAAGGCATATTATTGATTGCCCCATGGGAAGAGTACTTTTTAGATGAAATTAAGGATCTTTCTCTGGAGAGATTCCCTTTACCAGATATAGATCCCCAGACAAAGCTTAAGATAGAGGATTCAGTGGCGAAGATTGATAATGACGTCAAAGAAGGAGCTTATCATGCTTGGCTTGGTTATTATAATTCAATCAGGGAAATTGGGAGGGACAAGACCACTCTAGCTGAATTGGCGGCCAATTTTTCTAAATCAATTGGTTTACAAACACCTCCTGCTCTCTTCAGAAAGACTGCTCTAAAAATGGGTTTGAGAGATATTCCTGGCATTAAAATTCGTAGATAGAAGAATTGAAAATTTTATCACTGTGGACGGAA 2519 0.4291 MYSSILSERPRTISKLLCTFILARNMGGGPRTFPGGVNKWKWKRMHEKRARDKERRLLEQEKQIYQARIRSHIRAELAGKPDPGSTSHGPLTPEEHIKTLANRFMKEGDEDLWNTNDGPLKSPPPCFKELPGTNRSSRRPGSTGSLVDLRKLIPEGRNLVSNNGIRYLTNTNGNCVLARNYSVQSRRKFGSYDSSSAEDVFSSSLKGNSARSTIRNLVSNPRNMSNTSVDGYINNKKVTTKRRQKFWRNGSYSSESESEWDAEGEPGNYSRGCRLNFAGEEISGNGEDLRIGRDVRKMGSSASLGKYDVTSKRRMLPKLYDEVNDLSEQVESIRDQLSETKSAQNEEQKTEGEIMLSQRRFDECGISPLTVKALSLAGYIHMTWVQEASRSVCLEGKDALVKAKTGTGKSVAFLLPAIETVLKAMDSNTNQRVPPIFVLILCPTRELASQIAAEAKVLLKYHDGIGVQTLVGGTRFKVDQNRLESDPSQIIVATPGRLLDHIENKSGISVRLMGLKMLVLDEADYLLDLGFRKDVEKIVDCLPRQRQSLLFSATIPKEVRRISQLVLKREHAYIDTVGIGCVETPTKIKQSYLIAPHECHFQIVHHILKEHILQAPDYKVIVFCVTGMVTSFMYQLLREMKMNVREMHSRKPQIYRTRISDEFRESKQLILVSSDVSARGMNYPDVTLVIQVGIPCDREQYIHRLGRTGREGKEGEGILLIAPWEEYFLDEIKDLSLERFPLPDIDPQTKLKIEDSVAKIDNDVKEGAYHAWLGYYNSIREIGRDKTTLAELAANFSKSIGLQTPPALFRKTALKMGLRDIPGIKIRR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00145 828 PANTHER RNA HELICASE 330 752 - -
Bach10g00145 828 Pfam DEAD/DEAH box helicase 385 561 IPR011545 GO:0003676|GO:0005524
Bach10g00145 828 MobiDBLite consensus disorder prediction 115 145 - -
Bach10g00145 828 Gene3D - 583 807 IPR027417 -
Bach10g00145 828 FunFam Putative LRR receptor-like serine/threonine-protein kinase 414 509 - -
Bach10g00145 828 Pfam Helicase conserved C-terminal domain 606 711 IPR001650 -
Bach10g00145 828 CDD SF2_C_DEAD 588 721 - -
Bach10g00145 828 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 607 753 IPR001650 -
Bach10g00145 828 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 390 573 IPR014001 -
Bach10g00145 828 SMART ultradead3 378 591 IPR014001 -
Bach10g00145 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 729 IPR027417 -
Bach10g00145 828 Coils Coil 43 63 - -
Bach10g00145 828 Gene3D - 322 574 IPR027417 -
Bach10g00145 828 SMART helicmild6 631 712 IPR001650 -
Bach10g00145 828 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 359 387 IPR014014 GO:0003724
Bach10g00145 828 Coils Coil 316 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00145 Bach-Chr10 1026767 1031375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00145 361 737 Eukaryotic Initiation Factors Gene Family AT3G19760 28.101 7.11e-41 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00145 - - qsa:O6P43_034216 1188.71