Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00137 ATTTGGAGTGAGAGAAAGAGGGTTCGCAAGAATCGATTGGATGGGTATGGCGGGTGGCGTTAACAAGTTGATGATGAAGATGCAGTGTTGCGGGAACTTGTCGCCGCAGGCACACTACCCATCAATGACAAGGTTTCCCTCACCGGAAGCACAGAAAGCGGTGCAAGGCAGCTCCGAGGCTAAAGCAGTCTTCCGAGTTTTGGGAATGACGTGCGCTGCCTGTGCTGCTTCCATCGAAAAGGCTATCAAGCGCCTCCCTGGCATTCGAGACGCCTTCGTTGATGTCTTGAACGATAAGGCTCTCGTTTTCTACTTTCCATCTCTCGTTAATGATAAGAGAATCCGAGAAAGCATCGAAGACGCTGGATTTATAGCTGAATCCATTGAAGAAAAGTCCAATGAGAATTCATCTGAAATATGCCGAATCCACATAAAGGGTATGACTTGTACATCCTGCTCCTCCACCATTGAATCAACCCTGCAAGGCATACATGGGGTGCAGAAAGCACAAGTGGCATTGGCAACTGAAGAAGCACAAATTACATACGACCCAAAGATAGTGAGCCACGATCAGTTGCTTCAAGCTATAGAAGATACTGGGTTTGAAACCATACTCATAAGCACAGGAGAGCACATAAGCAAGATAGAACTTAAAATCGATGGCATGAAAAATGAGCAATCCATTAGAGCAATTGAAAGGTCTCTTGAGGCACTCCCAGGTGTTCAAAATATAGACATTTACCCGGACATAAACAAAGTTTCCATTGCTTATAAACCATATCTGACAGGACCTAGAACCTTCATCGAAGTCATAGAATCTTCAGGTTCAGGGTGTTTCAGAGCCATGATATATCCAGAAGAAAGAGGAAGAGAAAGTCACAGACAGCAGGAAATTAAGCAATACTACAAATTCTTGCTTTGGAGTTTGGCTTTCACGATACCTGTATTTTTAACATCCATGGTCCTCATGTACATACCTGGAATTAAGCATGTCTTGGATATCAAAGTTATCCATATGCTGACTGTTGGAATGATCTTGAAGTGGGAATTTTCAACCCCAGTTCAGTTTATCATAGGCCGAAGATTCTATGTGGGTTCCTACAAAGCTTTGCGCAAAGGTTCTGCTAACATGGATGTGTTGATTGCCATGGGAACAAATGCAGCTTACTTCTATTCTGTCTATGTGGTTGCAAGGGCTGCCTTCTCTCCAGATTTCAAAGGCAATGATTTCTTTGAGACCAGCTCTATGCTGATTTCATTTATTCTACTTGGCAAGTATTTGGAGGTGTTGGCAAAGGGAAAGACATCACAAGCCATTGCCAAGCTCATGGAGTTGACCCCTGATACAGCACTCTTGTTAACCCTGGATCATGATCAGGGAAATGTAGTTGCTGAACGAGAAATTGATAGCAGGTTGATTCAAAAAGATGATGTAATCAAAGTTGTTCCAGGTGCAAAAGTAGCATGTGATGGTTTTGTCATCTGGGGACAAAGCCACGTAAATGAGAGCATGATAACAGGGGAGTCTAGACCGGTGGCAAAGAAGAAAGGTGATATGGTAATTGGAGGAACTATGAATGAGAATGGGGTTTTGCATGTAAAGGTAACAAGGGTTGGATCAGAGAGTGCCCTCTCACAGATTGTCCGACTTGTTGAGTCTGCCCAAATGGCTAAAGCTCCGGTTCAGAAGTTAGCAGACCACATTTCCAAATACTTCGTGCCTCTGGTCATCTTACTTTCTCTTTCAACTTGGCTTTCCTGGGTTTTAGCTGGACAGTTCCAAGCGTACCCGAAATCCTGGATACCATCCTCCATGAATAGCTTTGAACTTTCTCTTCAGTTTGGGATCTGTGTCATGGTTATAGCCTGCCCTTGTGCTCTAGGACTAGCTACTCCTACAGCTGTTATGGTTGGTACTGGAGTTGGAGCAACTCAAGGGGTACTCATCAAAGGAGGCCAAGCATTAGAAAGTGCATCTAAGGTGAATTGTATCGTGTTCGATAAGACAGGAACTCTCACTCTTGGGAAGCCAGTGGTTGTTAACACACAAGTCCTTCAAAAGATGGCACTTAAAGAATTCTATGTATTGGTCGCTGCAGCGGAGGTGAACAGCGAGCACCCAATAGCCAAGGCCATTGTTGAACATGCCAAGAAATTCAAAGAAGATGAACAGAACCCTTCCTGGCCAGAAGCAAGTGGCTTTGTTTCCATTTCAGGCCATGGAGTGAAGGCCATTGTTCAAAATAAAGAAATAATGGTTGGTAATAAGAAGCTGATGCTGGATCATAACATAGCCATTTCACTTAAAGCTGCAGAAATACTAGCAGAAGCTGAAGGGATTGCTCAAACTGGGATTCTCGTATCCATAGATGGAGAAATTGCTGGTGTTTTGGCTGTATCTGACCCATTGAAACCGGGTGCCAATGAAGTTGTTTCCATACTCAAGTCTATGAAAATCAGGATTATCATGGTAACAGGCGATAACTGGGGAACCGCAAAATCCATTGCCAGGCAAGTTGGCATTGAAACTGTCATAGCAGAAGCTCAGCCTGAGGCTAAAGCAAATAAAGTCAATGATTTGCAGAATTGTGGCTACACTGTGGCAATGGTGGGAGATGGCATCAATGACTCACCAGCACTTGTGGCAGCTGATGTTGGAATGGCAATCGGTGCTGGCACAGATATTGCTATTGAGGCAGCTGATATTGTTCTCGTGAAGAGCAACTTAGAGGATATAATAATCGCCATTGATCTTGCCAAGAAAACCTTCTCCCGCATACGTCTAAACTATATTTGGGCTCTGGGTTATAATCTGCTCGCCATCCCCATTGCTGCGGGCACTATTTACCCATTCACTAGGCTCCGGTTACCTCCATGGATTGCAGGAGCTGCCATGGCAACCTCTTCTGTCAGTGTTATCTGCTCCTCCCTCTTGTTGAAGAACTACAAGAGACCTCAAAAGCTAAACAACTTGGAAATAACTGGTATAAAGATTGAATGA 3001 0.4409 MGMAGGVNKLMMKMQCCGNLSPQAHYPSMTRFPSPEAQKAVQGSSEAKAVFRVLGMTCAACAASIEKAIKRLPGIRDAFVDVLNDKALVFYFPSLVNDKRIRESIEDAGFIAESIEEKSNENSSEICRIHIKGMTCTSCSSTIESTLQGIHGVQKAQVALATEEAQITYDPKIVSHDQLLQAIEDTGFETILISTGEHISKIELKIDGMKNEQSIRAIERSLEALPGVQNIDIYPDINKVSIAYKPYLTGPRTFIEVIESSGSGCFRAMIYPEERGRESHRQQEIKQYYKFLLWSLAFTIPVFLTSMVLMYIPGIKHVLDIKVIHMLTVGMILKWEFSTPVQFIIGRRFYVGSYKALRKGSANMDVLIAMGTNAAYFYSVYVVARAAFSPDFKGNDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLMELTPDTALLLTLDHDQGNVVAEREIDSRLIQKDDVIKVVPGAKVACDGFVIWGQSHVNESMITGESRPVAKKKGDMVIGGTMNENGVLHVKVTRVGSESALSQIVRLVESAQMAKAPVQKLADHISKYFVPLVILLSLSTWLSWVLAGQFQAYPKSWIPSSMNSFELSLQFGICVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALESASKVNCIVFDKTGTLTLGKPVVVNTQVLQKMALKEFYVLVAAAEVNSEHPIAKAIVEHAKKFKEDEQNPSWPEASGFVSISGHGVKAIVQNKEIMVGNKKLMLDHNIAISLKAAEILAEAEGIAQTGILVSIDGEIAGVLAVSDPLKPGANEVVSILKSMKIRIIMVTGDNWGTAKSIARQVGIETVIAEAQPEAKANKVNDLQNCGYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLVKSNLEDIIIAIDLAKKTFSRIRLNYIWALGYNLLAIPIAAGTIYPFTRLRLPPWIAGAAMATSSVSVICSSLLLKNYKRPQKLNNLEITGIKIE 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00137 986 SUPERFAMILY Calcium ATPase, transmembrane domain M 399 931 IPR023298 -
Bach10g00137 986 CDD HMA 131 189 IPR006121 GO:0046872
Bach10g00137 986 ProSiteProfiles Heavy-metal-associated domain profile. 47 113 IPR006121 GO:0046872
Bach10g00137 986 Pfam E1-E2 ATPase 451 630 - -
Bach10g00137 986 FunFam Copper-transporting ATPase 1, putative 419 542 - -
Bach10g00137 986 FunFam Copper-transporting ATPase HMA5 46 117 - -
Bach10g00137 986 Gene3D - 200 269 - -
Bach10g00137 986 Gene3D - 619 914 IPR023214 -
Bach10g00137 986 NCBIfam copper ion binding protein 49 110 IPR006122 GO:0005507
Bach10g00137 986 NCBIfam copper ion binding protein 129 189 IPR006122 GO:0005507
Bach10g00137 986 PRINTS P-type cation-transporting ATPase superfamily signature 652 666 - -
Bach10g00137 986 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Bach10g00137 986 PRINTS P-type cation-transporting ATPase superfamily signature 857 876 - -
Bach10g00137 986 PRINTS P-type cation-transporting ATPase superfamily signature 782 793 - -
Bach10g00137 986 PRINTS P-type cation-transporting ATPase superfamily signature 880 892 - -
Bach10g00137 986 PRINTS P-type cation-transporting ATPase superfamily signature 804 814 - -
Bach10g00137 986 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 15 983 - -
Bach10g00137 986 SUPERFAMILY HMA, heavy metal-associated domain 197 265 IPR036163 GO:0046872
Bach10g00137 986 Gene3D - 419 542 - -
Bach10g00137 986 PRINTS Copper-transporting ATPase 1 signature 149 170 - -
Bach10g00137 986 PRINTS Copper-transporting ATPase 1 signature 74 97 - -
Bach10g00137 986 PRINTS Copper-transporting ATPase 1 signature 48 73 - -
Bach10g00137 986 PRINTS Copper-transporting ATPase 1 signature 103 123 - -
Bach10g00137 986 ProSitePatterns Heavy-metal-associated domain. 53 82 IPR017969 GO:0046872
Bach10g00137 986 NCBIfam HAD-IC family P-type ATPase 404 935 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach10g00137 986 SUPERFAMILY Calcium ATPase, transduction domain A 453 538 IPR008250 -
Bach10g00137 986 FunFam ATPase copper transporting beta 120 195 - -
Bach10g00137 986 SUPERFAMILY HMA, heavy metal-associated domain 43 116 IPR036163 GO:0046872
Bach10g00137 986 Pfam haloacid dehalogenase-like hydrolase 648 871 - -
Bach10g00137 986 FunFam Probable copper-transporting ATPase HMA5 749 914 - -
Bach10g00137 986 Pfam Heavy-metal-associated domain 129 189 IPR006121 GO:0046872
Bach10g00137 986 Pfam Heavy-metal-associated domain 50 110 IPR006121 GO:0046872
Bach10g00137 986 CDD HMA 50 113 IPR006121 GO:0046872
Bach10g00137 986 SUPERFAMILY HMA, heavy metal-associated domain 123 197 IPR036163 GO:0046872
Bach10g00137 986 ProSiteProfiles Heavy-metal-associated domain profile. 125 191 IPR006121 GO:0046872
Bach10g00137 986 NCBIfam heavy metal translocating P-type ATPase 364 966 IPR027256 GO:0006812|GO:0016020|GO:0019829
Bach10g00137 986 Gene3D - 124 196 - -
Bach10g00137 986 Gene3D - 43 114 - -
Bach10g00137 986 Gene3D - 738 788 IPR023299 GO:0000166
Bach10g00137 986 Gene3D - 659 737 IPR023299 GO:0000166
Bach10g00137 986 ProSiteProfiles Heavy-metal-associated domain profile. 200 266 IPR006121 GO:0046872
Bach10g00137 986 SFLD C1.7: P-type atpase like 634 908 - -
Bach10g00137 986 CDD HMA 203 262 IPR006121 GO:0046872
Bach10g00137 986 ProSitePatterns E1-E2 ATPases phosphorylation site. 654 660 IPR018303 -
Bach10g00137 986 ProSitePatterns Heavy-metal-associated domain. 131 160 IPR017969 GO:0046872
Bach10g00137 986 SFLD p-type atpase 634 908 IPR044492 -
Bach10g00137 986 SUPERFAMILY HAD-like 651 963 IPR036412 -
Bach10g00137 986 CDD P-type_ATPase_Cu-like 292 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00137 Bach-Chr10 974872 980321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00137 47 986 Primary Pumps ATPases AT1G63440 72.987 0.0 1429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00137 K17686 - gmx:100817431 1477.23