Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00124 TTTTGATTCAACAACCCGGAAAAATCCTAATCCGGGATTCTGGGTTCTTGTTTTGGATTCTCCGATTCGAAGAATCTACAAGCTGAGCCACACGCTTGCTTTTGTTGCCACTTTGGGAAAATAATTTATAATCGAACAAGTAAAGACCTAGACTCTACCTTTAGTTTTTGCCAAGTTAAGAATCGAGATGTAGAGAAGAGCACCTATTTCCATCTTTTCACAGAGTGAAGTTTCGGTTTATATGTTATTGTGGTCACTAGTCTGCAAAAGCAGGAAATGGTTGCAGATAATCTGAAGAAACAACTTGCTTTGGCTGTTAGAAGCATTCAGTGGAGCTACGCGGTCTTCTGGACTGTTTCAGCTGGCCAAACAGGAGTTTTGGAGTGGGATGAAGGATATTACAATGGGGATATTAAAACTAGGAAAACAAGTCAATCAGTAGAACTTAATTCAGATGAAATAGGTTTCCAGAGAAGCGAGCAACTGAGAGAGTTATACGAGTCCCTTGCAATTGCAGAAGCCAACCCCCAAGCTAAAAGGCCTTCAGCGGCATTATCCCCAGAAGATCTCACAGATACGGAATGGTATTACTTGGTTTGTATGTCCTTCGTATTCAACTTTGGCCAAGGGTTACCAGGAAGAACTCTAGCGAGTGGCCAACCCATTTGGCTGTATAATGCCCCTTGTGCTGATAGTAGAGTTTTTAGTCGATCGCTTCTGGCGAAGAGTGCATCCATTCAGACAGTGGTGTGCTTTCCTTTTCTGGATGGTGTTGTCGAGCTAGGTGCGACTGATCTGGTTTCAGAAGATCTCAGTCTCATTCAACATATAAGAACTTCTTTCTTGGATATTTTGGACTCCAAAGTTCCCAAGAAGTTTGGAGCTGCGTTAAACACAAGAAATGACAAGGGTGACACTTTTGATCATAATGCTTTTGACATTAAATTAACCCCCGAAGTAGGATGTGAAGTACCCAAGACGACTTCTCCTAATAGTAGTTCGAATGCATTTGAAGCCAATCAAGCAGCTGATGAGGCACTCATGGTTGAAGGGATAAATGGAGGTGCTTCCCAAGTCCAAAGCTGGCAAGTTCTGGATGATGAATTGAGTAATTGTCTTCATAATTCCATGAATTCTAGCGACTGTATATCTCAAACTTTAGCCAGTCCTGTTCTCAAGGGCGAAGACCCAATTGACCTTTGTGCGCAAGACCTTCAAGAGTGCAATAACACAAAAATGACTTCAATGGATCTCCAAAGTGATCATCGGCACTATCAGACAGTTCTTTCTATCCTTCTAAAGAGTTCAGACCAGTTAATTATGGGACCCCGTTTTCAAAATTCTCATCAAGAGTCCAGCTTTGTCAGTTGGAAGAAAGAAGGATTAATGGGTTGTCAAAGGCCTAGAGGAGGAGCCCCACAAAAGGTATTGAAAACTGTACTGTTTCAAGTTCCTCGTATGCACATGGATGGGCTGCTCGAGTCTCAAGAAGAAAATAACTATAAAGAGGGAATGAAACCAGAGGCTGATGAGAATGGCATGAACCGCGTATTGTCAGAAAGAAGGAGAAGAGCAAAACTAAATGAAAGATTTTTAATTCTTAGATCAATTATCCCTTCAATTAGTAAGGATGACAAAGTTTCAATACTAGATGATGCCATAGAGTACCTTAGAAAGCTTGAGAAAAAGGTCAGGGAGTTGGAAGCCCGCAGGGAGCTAATAGATTTAGAGACTAGAACTAAAAGAACACCTCAAGATATGGTGGAGAGGACTTCTGATAATTATTTTAACAACAAAACTGATAATGGAAAGAAGTCAGTGAAGAGGAAGGCTTGTGACATTGATGAGACAGGGCCAGAGATTGACTCCATTGGGTCAAAAGAAACTTGTACTAGTAATGTTACTATCAATATGAGTGACAATGAAGTTCTGATTGAAATGAAGTGTTCTTGGAGAGAAGGAGTGCTTCTGGAAATTATGGAAGCAGTAAGCGGTCTCCATTTAGATTTTCTTTCTGTTCAGTCATCAAAAGCTGATGGAAATCTTTGTCTGACCATCAAATCAAAGTTTAGAGGATCGACTGTTGCATCCGCGAAAAAGATCAAACAAGCACTTCACAAGGTGGCTTGCAAGTGTTGAATCTTGTATTCACCCAAATAAGCATTAAGCACAGTAATATTAGATTTTTATTTTTTTTTCACTTGTGATTATCTTGTACCATAGGAGGGTAATGTAGATTGTTTTGTTACAAGTTATTGAACTTTCGCAACAAGACTTCTGATACAAGGAAGTTGTTTGGCACATCATTAGTTATGTCGTGTGGGACTTGGAAATATGCCTTGGTTGACTTAGATTTGTGTAATGT 2365 0.4021 MVADNLKKQLALAVRSIQWSYAVFWTVSAGQTGVLEWDEGYYNGDIKTRKTSQSVELNSDEIGFQRSEQLRELYESLAIAEANPQAKRPSAALSPEDLTDTEWYYLVCMSFVFNFGQGLPGRTLASGQPIWLYNAPCADSRVFSRSLLAKSASIQTVVCFPFLDGVVELGATDLVSEDLSLIQHIRTSFLDILDSKVPKKFGAALNTRNDKGDTFDHNAFDIKLTPEVGCEVPKTTSPNSSSNAFEANQAADEALMVEGINGGASQVQSWQVLDDELSNCLHNSMNSSDCISQTLASPVLKGEDPIDLCAQDLQECNNTKMTSMDLQSDHRHYQTVLSILLKSSDQLIMGPRFQNSHQESSFVSWKKEGLMGCQRPRGGAPQKVLKTVLFQVPRMHMDGLLESQEENNYKEGMKPEADENGMNRVLSERRRRAKLNERFLILRSIIPSISKDDKVSILDDAIEYLRKLEKKVRELEARRELIDLETRTKRTPQDMVERTSDNYFNNKTDNGKKSVKRKACDIDETGPEIDSIGSKETCTSNVTINMSDNEVLIEMKCSWREGVLLEIMEAVSGLHLDFLSVQSSKADGNLCLTIKSKFRGSTVASAKKIKQALHKVACKC 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00124 620 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 422 484 IPR036638 GO:0046983
Bach10g00124 620 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 189 IPR025610 -
Bach10g00124 620 Coils Coil 458 485 - -
Bach10g00124 620 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 419 468 IPR011598 GO:0046983
Bach10g00124 620 SMART finulus 425 474 IPR011598 GO:0046983
Bach10g00124 620 PANTHER TRANSCRIPTION FACTOR TT8 4 617 - -
Bach10g00124 620 Gene3D - 416 486 IPR036638 GO:0046983
Bach10g00124 620 Pfam Helix-loop-helix DNA-binding domain 426 469 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00124 Bach-Chr10 881447 885153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00124 2 620 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 49.770 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach10g00124 bHLH-MYC_N 4.8e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00124 - - gmx:100808167 811.216