Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00116 ATGGCAGCATGGTTAAGTTTCACTAATTCAAATGGGTCGCCCGTAGACTGCCTTGACACTCTTTGTGCATATCAGGGTAACGGCTGTTTCCTTAACTTTGATCATTTAGTTAAAGACCATGTTGGTGATACTAAGGATGATAAAGCTAAACAAAAATGCTTGTTTTACCAACTTCTTTCGGTTTACCTAAAAGAGAATTCTTCTAGAGGCATTATTCGGCCCCTGCCGGTAATGCTTGGTGATGGTCAGTCGTTGGATCTGTACAAACTCTTCTCATGTGTGAAGGAAAAAGGTGGCTATACTTTGTTGTCGAAGAAAGGGTTGTGGGGTTCTGTGGCAAAGGAATTGGATTTGAACATTGAAATTCTGGCTTCTGTGAGATTAATTTACGAGAAGTATCTGAATGAGTTTGAAGGATGGCTCAGAAAAACTATTGGAGAAAAGAATTTCAATAATGGTTATCATGGTAGCCATTGGGGGTTTAGTTCATTGCCTATAGAACTTGAGAAGGAGCTTAGAGCTTTATTAAATCCGATCCCAAACTGGAAAGGTGATAGACTGTTGGAATCAGATCAAATCAGGAAGTACATTGATGTGGCTGATCAGAAGAGTGAAACAAACTTATTGGACTCCAAAAGTCAACTTACAATACGTGAGGATGTCCAACGTATCTGTGGTGATGATGATGAAAATTTTTGCAATGACGTTGATTATCACGTTGCTATCTTGGACGTAGAAGTTGCTCAGAAGGAATGTAATTCTCGTAAGCGCAAACGAGAAGAATCATCTGGAATGCTAAACTGGATAAGACATATTGCAAAGCATCCTGTTGAACCTTCAATTAAACCAATACCAGAAATATCCAAGTGGAAGGAGTACAAAGGCAACGACTTCTGGGTCCAGATATTGAAGGCAAGAGATGTTCTGTTGCTGAGGCAGTGTGTTGAACAAAATGGTGAATCATCTTCCTTGCAGAAACTGAAGATGCATCCTGCCATATATGAAGATCAGGTTGCTTTCAGCTCAAAGTCTTCAATGAAGTTGAGATGTAGTGAAAGGCACCCTACCTCGGTTAAGTCTCGTTTATGTTCTTGTTGCAATTCTCAAGTGGCCACTGGACACAAGGCAACAACTGCAGGCAATACAGAGGTAGAAAATGGTCCTCCGGAGCAAACAACTGTGACGGTTGATTTGTTTACTGCCAAGGGGTCTAAGCCATCTGGGGATGATGCCATCGAAAAGCAAGTTTCTGTAGGTCCTCTTTTTCAAGCTGAAGTTCCTGAATGGACTGGTGTTGTTTGTGAAAGTGACTCTAAATGGTTAGGCACACAAGTATGGCCTTTGAAATATATTCAGCAAAATCCTGATGCTGAAACGGAGTTTACTGGTAATGGAAGAGAAGAGAAGTGTAGCTGTGAATTTCAAGGCTCCGTTGAATGTGTTAGATTTCACATTGCTGAGAAGAGGATGAAATTGAAGCTGGAATTGGGTTCAGCATTTTACCTTTGGAGATTTGATCGTATGGGTGAAGAAGTTTCACTCCAATGGACAGCTGAAGAGGAAAAGAAATTTAAGGATGTAATGAGGTCAAGTCTTCCCTCCCAAATTAGGTACATTTGGAACCACTCTTTCAAGTACTTTCCAAAGAAGACAAGGAACAACTTGGTTAGCTATTACTTCAATGTTTATCTTATCCAGCGCAGAATCTATCAGAATCGTGTGACTCCAAATTGTGTTGATAGTGATGATGAAGAACTAGAATTTGGGTCTCTAAGCGATGGTTTTGGAATGGAAGCTGTCAAGGGTCCAGGTATCAATTTCCTGGAGTGTTGTCAGAACAAGCAGTGCACTGATCCGGAGTAG 1863 0.4079 MAAWLSFTNSNGSPVDCLDTLCAYQGNGCFLNFDHLVKDHVGDTKDDKAKQKCLFYQLLSVYLKENSSRGIIRPLPVMLGDGQSLDLYKLFSCVKEKGGYTLLSKKGLWGSVAKELDLNIEILASVRLIYEKYLNEFEGWLRKTIGEKNFNNGYHGSHWGFSSLPIELEKELRALLNPIPNWKGDRLLESDQIRKYIDVADQKSETNLLDSKSQLTIREDVQRICGDDDENFCNDVDYHVAILDVEVAQKECNSRKRKREESSGMLNWIRHIAKHPVEPSIKPIPEISKWKEYKGNDFWVQILKARDVLLLRQCVEQNGESSSLQKLKMHPAIYEDQVAFSSKSSMKLRCSERHPTSVKSRLCSCCNSQVATGHKATTAGNTEVENGPPEQTTVTVDLFTAKGSKPSGDDAIEKQVSVGPLFQAEVPEWTGVVCESDSKWLGTQVWPLKYIQQNPDAETEFTGNGREEKCSCEFQGSVECVRFHIAEKRMKLKLELGSAFYLWRFDRMGEEVSLQWTAEEEKKFKDVMRSSLPSQIRYIWNHSFKYFPKKTRNNLVSYYFNVYLIQRRIYQNRVTPNCVDSDDEELEFGSLSDGFGMEAVKGPGINFLECCQNKQCTDPE 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00116 620 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 45 615 - -
Bach10g00116 620 ProSiteProfiles ARID domain profile. 49 142 IPR001606 GO:0003677
Bach10g00116 620 SUPERFAMILY ARID-like 49 143 IPR036431 GO:0003677
Bach10g00116 620 SMART ARID_2 46 138 - -
Bach10g00116 620 Gene3D - 38 150 IPR036431 GO:0003677
Bach10g00116 620 Pfam ARID/BRIGHT DNA binding domain 54 138 IPR001606 GO:0003677
Bach10g00116 620 SMART bright_3 50 143 IPR001606 GO:0003677
Bach10g00116 620 CDD ARID 55 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00116 Bach-Chr10 833273 836778 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Bach10g00116 ARID 2.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00116 - - gmx:100819320 717.613