Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00115 TTCTTCTCTCGCTTGCGCGCTGGGAACTTACTGAAGCAGTTTTTCTTCTTCTTGAAATTCTATTTCATTCTTACGCTTCGGTCAAATTCTACATCGAAAAGGTAAAACGATGCGATTGGAGATATTAGTAACTTTTGGGCGCTGGAGATAAGACAAGATGGGTGGTTGCTGTTGTTGTTCTTCCAGAGGAACTGAATTGAACGGTCCACCAGCATACTTCTATTATCCAAGAGCATCAGACGAGCGTGTTCCTCTATCACCTCACCAGGCCGCTGCATCTGCTTTCTCCGGGGGACTCCTAGTTGATACTAATCTAGACACTTCAATTCCTGATACCTATAGACCACCTCCAGCTCCTATCCCTTTCAATGCTACATTAATTGTTAGTCAAACTCCACCTGTGACTCAAGAAATTTATGGCAACAAGACTAATGGGTCCCTGCATTCTACAAATTATAATTCAGTTCAAGAAACAGTTTCTGGTGATGGTCATGGAACTGTGGCTAAGTTGGAAGAGCAGAAGGAATCAGAGAGCAAAGTTGAGGCTGATTTAGAACTTAACTCGCTAAAGGGGTCAGAAATTCAACTTCCGAAGTTGGCAAAACCTATCATTTCAGAAGAGGATGGATGTCCAATTTGTTTAGAAGAGTATGACACAGAAAATCCAAAACTCACTGCAAAATGCGACCATCACTTTCACCTTGCTTGCATTCTGGAATGGATGGAAAGAAGTGAAACTTGTCCTGTATGTGATCAGGCTATGGTTTTCAGCCCTCCAATTGAGTTATAAATATAAACGAATTAATACAGTGTGTAATATATTGTTTGAGAAGCCGATATTATAAAATCATGATAGTTCAGTTCTGGGTCTTCTGGCAACCCAATTATAAGGCTATCTTTTGGTACTTTTGTTTCCTGAGAGGGTTTGTTCCAATTTTGGTGTAGAGTTCTTGTGTTGATTACGTGAGAAATTGAAG 977 0.4043 MGGCCCCSSRGTELNGPPAYFYYPRASDERVPLSPHQAAASAFSGGLLVDTNLDTSIPDTYRPPPAPIPFNATLIVSQTPPVTQEIYGNKTNGSLHSTNYNSVQETVSGDGHGTVAKLEEQKESESKVEADLELNSLKGSEIQLPKLAKPIISEEDGCPICLEEYDTENPKLTAKCDHHFHLACILEWMERSETCPVCDQAMVFSPPIEL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00115 210 SUPERFAMILY RING/U-box 149 205 - -
Bach10g00115 210 Coils Coil 115 135 - -
Bach10g00115 210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 204 IPR013083 -
Bach10g00115 210 SMART ring_2 158 198 IPR001841 -
Bach10g00115 210 CDD RING-H2_AIRP1-like 154 202 - -
Bach10g00115 210 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 38 205 - -
Bach10g00115 210 ProSiteProfiles Zinc finger RING-type profile. 158 199 IPR001841 -
Bach10g00115 210 FunFam Putative E3 ubiquitin-protein ligase RHB1A 135 203 - -
Bach10g00115 210 Pfam Ring finger domain 158 198 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00115 Bach-Chr10 827826 830560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00115 1 204 C3H Transcription Factor Family AT5G41350 55.450 4.94e-70 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00115 - - gmx:100816369 330.487