Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00113 ATGTTCCGATTCTGTTTTCATTTCATGAAAATTTTGAGAAGAAAAAGGACAAAATTCAATCGCGCGTCTGGGGCAAGGTCATCCGAGTTGACTCGTTTTTCTGCTTCCAAGATGCCTTACACAAGGAGAGAAAGGTCTTCTTCACCTCGTGACTCTGTTTCTCCTGTGAGGGGCCGTCGATCAAGGTCAAGGTCAAGGTCGTTATCTAGGGCCAGGAGGAGTCGCTCCAGGAGTCAAGATTCTATAAATGTAGCCAATCCTGGAAATAATTTGTATGTAACTGGCTTGTCCACAAGGATCACTGCTGGTGATCTTGAGAAGTATTTTGGCAAGGAAGGAAAGGTTGTTGAGTGTCACCTAGTTACAGATCCTCGCACCAAAGAATCCCGTGGGTTTGGTTTTGTAACCATGGAAACTAAGGAGGATGCTGCACGCTGTATCAAGTATCTGAACCGCTCTGTTTTTGAAGGTCGATTAATAACCGTGGAAAAGGCAAAGAGAAAGCGTGCCAGGACTCCAACTCCTGGAAGGTACTATGGTTTGAGAGATAGACGAGGACGTGGATCGAGACGGTCTCGTAGTTACTCGCCCAGGCGATATCAGGACAGCGATCATTATTCAAGGGAGCGACGAGGAAAATCTCGTTCTCCTTACAGTAGGAGGACGGATGATTACTCTGACTCTTATAGTAGGAGGAGGGAACGCTCCTTGTCAGCCAGTGATAGTCGCTATCCAAGATAACCCTACAACTTAAATGCAAGATCTCATCTTTTTTTTTTTTTTGGTCAAGTACAGAATCATCCTTGATCCCCCGATTTCGTCCCCACTTCCTTCATTGCTGTCTGTATCATTATGTATGCGTAAGAGTTAATCAATCTTTATATCTTCCTGTCCCATATGTTAGGTTAGTGGTACTAAGCTTCTCTTTTGATTGGTTTGGTCTTTTCCCAGCTCGTGTTGAATTCGTTAGTGTTATCATTTGGGCTAATCCGTGCGGGGTATCTGTGTCCTCCAATTCTTTATGGATAGCTACAGAAGTTATAGATGGTT 1050 0.4419 MFRFCFHFMKILRRKRTKFNRASGARSSELTRFSASKMPYTRRERSSSPRDSVSPVRGRRSRSRSRSLSRARRSRSRSQDSINVANPGNNLYVTGLSTRITAGDLEKYFGKEGKVVECHLVTDPRTKESRGFGFVTMETKEDAARCIKYLNRSVFEGRLITVEKAKRKRARTPTPGRYYGLRDRRGRGSRRSRSYSPRRYQDSDHYSRERRGKSRSPYSRRTDDYSDSYSRRRERSLSASDSRYPR 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00113 246 MobiDBLite consensus disorder prediction 43 58 - -
Bach10g00113 246 MobiDBLite consensus disorder prediction 166 246 - -
Bach10g00113 246 MobiDBLite consensus disorder prediction 195 240 - -
Bach10g00113 246 MobiDBLite consensus disorder prediction 19 88 - -
Bach10g00113 246 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 91 160 IPR000504 GO:0003723
Bach10g00113 246 Gene3D - 15 173 IPR012677 -
Bach10g00113 246 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 75 236 - -
Bach10g00113 246 CDD RRM_SAFB_like 90 163 - -
Bach10g00113 246 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 89 167 IPR000504 GO:0003723
Bach10g00113 246 SMART rrm1_1 90 163 IPR000504 GO:0003723
Bach10g00113 246 SUPERFAMILY RNA-binding domain, RBD 86 195 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00113 Bach-Chr10 815653 819148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00113 90 171 Eukaryotic Initiation Factors Gene Family AT1G49760 39.024 1.71e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00113 K12897 - qsu:111986068 214.157