Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00107 TGAAGGTCATCATCAACCCCTGTCTGATCTTCTATTTCTGAGGAAGTACATCTCATCTTTCTTCCTAGGCTGGTTTCCATGGTACACCATGTTGGCTTATTAACAGAACAAGTCTGAGAAAAAGGAACTCTCCAACTTGCTCTCCAATATACCATCATCATCGTCAAGTTGCCCCCACCGAGCACCACCATCAGCATCACCACCTCCACCACTGAATTGGATCCAATACCCACCAACCTAACTACTATACTCCTCTATTCGTTACGTGGAGGGTTTCTGGTTCTATTGTGGTAGACTCCAACTCCATCGGTCCTCATGAAACTCGAGCCGTCTCAAAAAATATAACTACTTGCAAAAAAAGAAACCGATCCAAAGCAGAAGAAGAAACCAAAGTGGGATTTCATGGCTCGAGAGCTGTGTGAAGATAAATCGAGGGATATGGTATCATCATCGGCTGGATTCTGCTACTCCGACGTATCATCAGGTTCAGGCAACCCAACGATTCAAACCCAGATGGTGAACCAGATACAAGGCTTTGTCTCCGTCTCCGACTCCGACACAGACATGTTCAACCTCAGCACAGGCATGGAGATGATAGGGTTTTCCAAGAATCTACAGCAACAGACTGACACTAATCCTGTGATGTGGAAGAGTTTCATCGCCAAACCAGCAGGACCTTCCTCCTCTTCCAAGACCACCAATTTCTATCATCATCAGCAGGAATATCATAAACCAGAGTTCACACCTGGTATTTCCGAAACAACCAGCGACAATCTAATAGTTGCGCCTCATGACCCTTCCCCTTGGCAAGACAACAGATTATTAGTTGATGATTCATCTCTGAGGTGTGTGTTCCCTTGCGAAGGAAACGAAAGGCCTAGTCAAGGCCTTTCACTCTCTCTTAGTTCAACCAATCCTTCAAGTATTGGGTTACAATCTTTCGAACTTAGGCAAACTAATCATCACCTGCAGAACCAACATGATTTTGTTTCTTCAACTTGTAGAGATGGTTTCTTTGGAAAAACGGCTGCCAACACTCAACAGCAACAACAGATGTTGCAGGATGGGTATCTGGGTAAATCTGCTGCTAATCTTTATCATGGACAAGGACATTTCCTGCTCAAGAACTCCAAGTACTTGGTCCCAGCACAGGAGCTTCTGAACGAGTTCTGTAGTCTTGGAACAAAGCCAAGTGATATAATAAAGCAAAAGTCTCAAAAGAACAAGCAGTTGGAAGAAGATAGCGGCAGTGGTTCCTCAAAGAAGCATGTGCTTAGCTCCTTAGAATTAGTGGAATTGCAGAAGAGAAAGACAAAGCTGCTTACGATGCTGGAAGAGGTGGACAGAAGATACCGTCACTACTGTAATCAGATGAAGGCCGTTGTATCATCGTTTGAAGCAGTGGCTGGGCATGGAGCGGCTGCAGTGTACTCAGCGCTCGCTTTGAAGGCAATGTCAAGGCATTTTAGGTGTTTGAAAGATGGGATTTTGAGTCAGATTCAGGCGTCAAGGAAAGCCATGGGAGAGAGAGACCCAATTGCACCAGGTACAACAAAGGGTGAAACACCGAGACTGAGAGTCATTGACCAAGCAATTAGACAACAAAAGGCCTTCCAGCAAATCAGCATGATGGAAAGCCATCCCTGGAGGCCCCAACGTGGCCTTCCTGAGAGATCCGTCTCAGTTCTTCGAGCTTGGCTTTTCGAGCATTTTCTACACCCGTATCCAAGCGATGTTGATAAACATATTTTAGCCCGCCAAACTGGTCTCTCAAGAAGCCAGGTATCAAATTGGTTTATTAATGCGAGGGTGAGACTGTGGAAGCCAATGGTGGAAGACATGTACTTGGAAGAAGTGAAGGAGCATGAAAACAACATGGCTTCCTCCAAGGGGGTCTCCGATCCCGAAGACAATAGTCAGAATATCGTCTCAAATCGAGCAGAAGATGAGAAGCCGACACCTGATCGACTCGTACGGATTGACTCGGAGTGTGTATCCTCCATCGTCAATAATTCATCAGAACACAGAGATGACCCTATTGCAAAGAGCAGTAAAACCCTCCAAAACCACCATCATATACAGCAAGACCAATGCCTGGGGAGAGTCGCAGACACGTTTGGGTCCATGGAGCTTGATTTTTCATCATACACCACTAGTCACCACTCAGCAGGCATGGTTTCCTACAGCAACGAGAATTTCAACGCCGGTGGTGTGTCGCTGACGCTAGGGTTACAGCAACATGGTGGAAGCGGGGTGAGCTTGGCTTTCCCACCTCCCACTCACAGTTCACTCTTGTACCCAAGGGAACAAATGGAAGATTGTCAACCAGTTCAGTACTCGCTTTTGGACGGCGAAGGACAAAATCTTCCCTACAGAAATTTGATGGGGGCACAGTTGCTTCATGATTTAGCAGGGTAAGAAGAAGTACATTCTAATCGATGAGGACGGACGGGAACGATGGATATCTATCACGTGCATGATATATACTACATATGTTTAATGAAGATGGTGAGGTGAGGGCGTGAAATTAAGTAGAAAGAATGGTCTTACCTTT 2554 0.4577 MARELCEDKSRDMVSSSAGFCYSDVSSGSGNPTIQTQMVNQIQGFVSVSDSDTDMFNLSTGMEMIGFSKNLQQQTDTNPVMWKSFIAKPAGPSSSSKTTNFYHHQQEYHKPEFTPGISETTSDNLIVAPHDPSPWQDNRLLVDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSSIGLQSFELRQTNHHLQNQHDFVSSTCRDGFFGKTAANTQQQQQMLQDGYLGKSAANLYHGQGHFLLKNSKYLVPAQELLNEFCSLGTKPSDIIKQKSQKNKQLEEDSGSGSSKKHVLSSLELVELQKRKTKLLTMLEEVDRRYRHYCNQMKAVVSSFEAVAGHGAAAVYSALALKAMSRHFRCLKDGILSQIQASRKAMGERDPIAPGTTKGETPRLRVIDQAIRQQKAFQQISMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEDMYLEEVKEHENNMASSKGVSDPEDNSQNIVSNRAEDEKPTPDRLVRIDSECVSSIVNNSSEHRDDPIAKSSKTLQNHHHIQQDQCLGRVADTFGSMELDFSSYTTSHHSAGMVSYSNENFNAGGVSLTLGLQQHGGSGVSLAFPPPTHSSLLYPREQMEDCQPVQYSLLDGEGQNLPYRNLMGAQLLHDLAG 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00107 671 Pfam Homeobox KN domain 432 471 IPR008422 GO:0003677|GO:0006355
Bach10g00107 671 ProSiteProfiles 'Homeobox' domain profile. 412 475 IPR001356 GO:0003677
Bach10g00107 671 CDD homeodomain 415 476 IPR001356 GO:0003677
Bach10g00107 671 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 148 502 - -
Bach10g00107 671 SMART HOX_1 415 479 IPR001356 GO:0003677
Bach10g00107 671 SUPERFAMILY Homeodomain-like 416 481 IPR009057 -
Bach10g00107 671 MobiDBLite consensus disorder prediction 494 513 - -
Bach10g00107 671 Coils Coil 296 316 - -
Bach10g00107 671 MobiDBLite consensus disorder prediction 491 557 - -
Bach10g00107 671 SMART prehox3 234 364 IPR006563 -
Bach10g00107 671 Gene3D - 418 480 - -
Bach10g00107 671 FunFam BEL1-like homeodomain protein 4 418 480 - -
Bach10g00107 671 Pfam Associated with HOX 240 362 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00107 Bach-Chr10 774977 778829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00107 138 670 Homeobox Transcription Factor Family AT5G41410 47.089 1.27e-141 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bach10g00107 POX 2.7e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00107 - - tcc:18606572 921.383